Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1107 ATGGGGCAGACATTGGGTTGTGTGCAGGTTGACCAGTCAAGCGTGGCAATCAAGGAGGTTTTCGGAAAGTACGATGATGTTCTTCAGCCTGGTTGCCACTGTGTTCCCTGGTGTATTGGTAGTCAGATTTCTGGTTCCCTTTCTCTGCGTGTGAAGCAGCTTGATGTTCGTTGTGAAACCAAAACCAAGGACAATGTTTTTGTTACTGTGGTTGCTTCAATCCAGTACCGAGCACTGGCAGATAAGGCTGTGGATGCTTACTACAAGCTCAGTGATACCAAGGCACAGATTCAAGCTTATGTTTTTGATGTTATCAGGGCAAGTGTTCCGAAGATGGAGCTGGATTCTGCTTTTGAGCAGAAGAATGAAATTGCAAAGGCAGTTGAGGAAGAACTTGAAAAGGCTATGTCAGCTTATGGCTATGAGATAGTTCAGACTCTTATTGTGGATATTGAACCAGATGAGCGTGTCAAGAAAGCCATGAATGAGATCAATGCTGCTGCAAGATTGAGGGTGGCTACAAAGGAGAAAGCTGAAGCAGAGAAGATACTGCAGATTAAGCGGGCAGAAGGTGATGCTGAATCAAAGTATCTTGCAGGGCTTGGAATAGCTCGTCAGCGCCAAGCCATAGTAGATGGGCTGAGGGACAGTGTGCTGGCTTTCTCTGAGAATGTGCCAGGCACATCATCAAAGGATATCATGGACATGGTTCTGGTGACCCAATATTTTGACACCATGAAGGAAATTGGTGCATCTGCAAAATCCAATGCTGTTTTCATTCCACATGGACCTGGTGCTGTGAAAGATATTACTTCACAAATTAGGGATGGTCTTCTCCAAGGAAATGCAACAGAGTCTTAA 861 0.4506 MGQTLGCVQVDQSSVAIKEVFGKYDDVLQPGCHCVPWCIGSQISGSLSLRVKQLDVRCETKTKDNVFVTVVASIQYRALADKAVDAYYKLSDTKAQIQAYVFDVIRASVPKMELDSAFEQKNEIAKAVEEELEKAMSAYGYEIVQTLIVDIEPDERVKKAMNEINAAARLRVATKEKAEAEKILQIKRAEGDAESKYLAGLGIARQRQAIVDGLRDSVLAFSENVPGTSSKDIMDMVLVTQYFDTMKEIGASAKSNAVFIPHGPGAVKDITSQIRDGLLQGNATES* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1107 286 PANTHER STOMATIN-LIKE PROTEIN 2, MITOCHONDRIAL 1 284 - -
Lja2g1107 286 Coils Coil 170 190 - -
Lja2g1107 286 Coils Coil 118 138 - -
Lja2g1107 286 SUPERFAMILY Band 7/SPFH domain 47 171 IPR036013 -
Lja2g1107 286 CDD SPFH_like_u4 10 278 - -
Lja2g1107 286 PANTHER HYPERSENSITIVE-INDUCED RESPONSE PROTEIN 2 1 284 - -
Lja2g1107 286 Pfam SPFH domain / Band 7 family 9 182 IPR001107 -
Lja2g1107 286 Gene3D Band 7 domain 42 167 IPR036013 -
Lja2g1107 286 SMART PHB_4 5 165 IPR001107 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1107 Lja-Chr2 10507939 10510809 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g1107 - - gmx:100789295 515.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g1107 2 10507939 10510809 Lja2g1107 2 10507939 10510809 ECH