Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1106 ATGCAGCTTTCACCATCACCAGTATTCACCACCATGTTTGCATCAACCAAGTCTTCAACTCTGTCATCACCTTTATTCTCCCTCCGCAGAACCTCTTCCATTTCCAAACCCAACTTATTCAACCTCGTTCCGATGAAGGCCACTCCTCTCAGAAACCTCTCTGTGTCCTCTAGCTTCCAATCACAAAATGGATCACCACAGAAATCATCAATTCAGGGGGGTGAAGCTTTTTTCAGGGGAGTGTTGGAAAATATGCAATCTGTGTACTTGAACAGGAACCCTACTGCAAAGGCCATATTGGACCTTGTTCACTCTGCTGATAACAACTCCATATGCTATGATCATCTTGCTTTCAGGACATTTGGGGTTAATGGTCATGGAATTGACTCCATGGCTAGTTTTTTCCTGGATTATGGCTATACGCAGCGCGATGAGTTGAGGTTTCCAGCCAAAAAGTTGAGGGCCTTGTGGTTTGCTCCTCCTTCTGATTCACTTGCTGGAAGTGGCAGTGGCATGAATGGGCCATTGCCCAGAATATTTATTTCAGAGCTACTGGTAGATCAGATGAGTCCACAAACTCAGGAAATAATTCGGAAATACACTGAATCATCTGGTATTGGAAACAAGCACGCAGCTCTTGCGAGTTCCCTGGGACTTCTGACATGGGAAAAGCCATTATATTCTGAGTTTCAGCAATTGGCAAGTGAAAGTGAGTATGCTGCCTGGGCACTAGTAAATGGGTATGCGGTGAACCATGTTACTATATCCACTCATCGTCTGAAAACTCATTTGAGGGATATAAAAACACTAAATCAGTTTATTGAAGAGAGTGGATTCAGACTGAATTCTGAAGGAGGAGTACTGAAAGTGAGCCCTGATGGTCTTCTTCTGCAAAGTTCAACTGTAGCAGATTCGGTTTCTTTCCAATTTTCTGATGGCCTAACTAAATCAGTTCCGTGCTCGTACATTGAATTTGCTGAACGTCTGGTGCTGCCGCAGTATAAAAATTTGCCTGACACAGAGGTTAAAGAGTTCCATAGGAGGGATGGTTTTGAGGTAGCAAGTGCTGACAAGATCTTTGAAAGCACATCCAAGGAGCAAGTGAGCAGGGTAGGCTCATAA 1122 0.4394 MQLSPSPVFTTMFASTKSSTLSSPLFSLRRTSSISKPNLFNLVPMKATPLRNLSVSSSFQSQNGSPQKSSIQGGEAFFRGVLENMQSVYLNRNPTAKAILDLVHSADNNSICYDHLAFRTFGVNGHGIDSMASFFLDYGYTQRDELRFPAKKLRALWFAPPSDSLAGSGSGMNGPLPRIFISELLVDQMSPQTQEIIRKYTESSGIGNKHAALASSLGLLTWEKPLYSEFQQLASESEYAAWALVNGYAVNHVTISTHRLKTHLRDIKTLNQFIEESGFRLNSEGGVLKVSPDGLLLQSSTVADSVSFQFSDGLTKSVPCSYIEFAERLVLPQYKNLPDTEVKEFHRRDGFEVASADKIFESTSKEQVSRVGS* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1106 373 CDD VOC_like 81 356 - -
Lja2g1106 373 Gene3D - 78 330 - -
Lja2g1106 373 SMART DUF1338_2 78 364 IPR009770 -
Lja2g1106 373 Pfam Domain of unknown function (DUF1338) 78 363 IPR009770 -
Lja2g1106 373 PANTHER - 47 370 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g1106 - - gmx:547714 590.112
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g1106 2 10496960 10500704 Lja2g1106 2 10496960 10500704 ECH