Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1102 ATGGCGTCATTGTTCAAGATCAAGAACAATGCCTCTTCTTCTCTCTTCTTCACCATGATCACCTTCTTGCTGTTCTGCATCACCACAACATGCAGCAGCACAGGGGGGCACTGGGTTCAGCTACAACGCAGCATAGGCATCTCAGCCATGCACATGCAGGTCATGAACGACAACAAGGTGGTCATCTTCGACCGCACCGACTTCGGCCCATCCAACATCTCCCTCTCCAACGGCCGCTGCCGCTTCAACCCCCGTGACATGGCCCTCAAGCTCGACTGCACCGCCCACTCCGTCCTCTACGACCTCACCACCAACACTTTCCGCCCTCTCACCATCCAAACCGACGCATGGTGCTCCTCCGGCGCCCTCACCCCCGACGGCACCCTCCTCCAAACCGGCGGCTTCAACGACGGCTACCACAAGCTCCGCACCTTCACCCCCTGCCCACAACACAACCTCTGCGACTGGCTCGAACTCCCCCAGAATCTCACCTCCCCTCGCTGGTACGCCTCCAACCAAATCCTCCCCGACGGAAGAATCATCGTCGTCGGAGGACGCAACGCCTTCACCTACGAATTCGTCCCCACTCGCGACACGGCGTCGTTTCACTACCTCCGATTCTTGCGCCTCACGCGTGACCCGAACCCGGGTGAAGAGAACAATCTTTACCCGTTCTTGCATCTCTTACCCGACGGCAACCTCTTCATCTTCGCCAACCGCCGCTCCGTCCTCTTCGACTACAACCGCCACAGAATCCTCCGGGAGTATCCAATCATGCCGGGGATCGAGAAAAGAAACTACCCCAGCACCGGGTCATCCGTTTTGCTTCCATTGAACCTCACCGGGTTCGGACCAGACAGGACCCGTTTACCCGTCGCCGAGGTGATGATCTGCGGCGGCGCTTACCCCGGCGCGTTCACCTTGGCCAGAAGGTTCAGAGTGTTTCTTGAAGCCTCCAGAACGTGCGGGAGGATTCGGGTCTCCGACCCGAAACCCGGATGGGTAATGGAAACCATGCCCATTCCTCGGGTAATGCCCGATATGATCTTGCTGCCTACAGGGAACGTGATGATCTTGAACGGCGCAGCAAATGGTACCGCAGGGTGGGAAAACGCGGCGAACCCGGTTTTTTACCCGGTTCTATACAGACCCGGTTTGCCTGACCCGTTACAGAGGTTCCAGCTTCTATCTCCGGCGAACACTCCGAGAATGTATCATTCCGCGGCGGTGCTGTTGCCAGATGGAAGGGTGTTAGTAGGTGGCAGCAACCCACACCGGGTTTACGATTTTCGGGGCCCGTACCCGACTGAATTGAGCTTGGACGTGTACTACCCGGATTATTTTGAGCCTGAATCGGAGCCGCTGCGGCCTTCGATTATTGCGGTGGAGGCGGTGAACAATACGGCGCCGTATGGTGGCTTGTTTGCCGTGACGTTCTCATTGCGGGATTACCGTGCGGTTCCAGGGGTCAGTGTGACCCTGGTGGCGCCGTCGTTCACGACGCACTCGTTTGCTATGAACCAGCGGGTGGTGGTGTTGGATGTTGTGGCGGTGGATGAGGTGGCGCCGTCTTCTTACAAGGTTACGGTGCGTGGGCCACCATCTCTCACGGTGGCCCCACCTGGGTACTACATGCTTTATATTGTCCACGCTGGAATTCCAAGTGTTTCGGTCTGGGTTCAGGTTAGATGA 1692 0.5768 MASLFKIKNNASSSLFFTMITFLLFCITTTCSSTGGHWVQLQRSIGISAMHMQVMNDNKVVIFDRTDFGPSNISLSNGRCRFNPRDMALKLDCTAHSVLYDLTTNTFRPLTIQTDAWCSSGALTPDGTLLQTGGFNDGYHKLRTFTPCPQHNLCDWLELPQNLTSPRWYASNQILPDGRIIVVGGRNAFTYEFVPTRDTASFHYLRFLRLTRDPNPGEENNLYPFLHLLPDGNLFIFANRRSVLFDYNRHRILREYPIMPGIEKRNYPSTGSSVLLPLNLTGFGPDRTRLPVAEVMICGGAYPGAFTLARRFRVFLEASRTCGRIRVSDPKPGWVMETMPIPRVMPDMILLPTGNVMILNGAANGTAGWENAANPVFYPVLYRPGLPDPLQRFQLLSPANTPRMYHSAAVLLPDGRVLVGGSNPHRVYDFRGPYPTELSLDVYYPDYFEPESEPLRPSIIAVEAVNNTAPYGGLFAVTFSLRDYRAVPGVSVTLVAPSFTTHSFAMNQRVVVLDVVAVDEVAPSSYKVTVRGPPSLTVAPPGYYMLYIVHAGIPSVSVWVQVR* 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1102 563 Gene3D Immunoglobulins 455 563 IPR013783 -
Lja2g1102 563 CDD E_set_GO_C 454 562 IPR015202 -
Lja2g1102 563 SUPERFAMILY E set domains 455 562 IPR014756 -
Lja2g1102 563 Pfam Galactose oxidase-like, Early set domain 456 562 IPR015202 -
Lja2g1102 563 Pfam Glyoxal oxidase N-terminus 50 300 IPR009880 -
Lja2g1102 563 PANTHER F14L17.20 PROTEIN 14 562 - -
Lja2g1102 563 PANTHER SECRETED PROTEIN-RELATED 14 562 - -
Lja2g1102 563 Gene3D - 32 453 IPR037293 -
Lja2g1102 563 SUPERFAMILY Galactose oxidase, central domain 83 449 IPR011043 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1102 Lja-Chr2 10466389 10468185 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g1102 - - cam:101500908 871.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g1102 2 10466389 10468185 Lja2g1102 2 10466389 10468185 ECH