Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1101 ATGAATGGCGTTGTATCTTGTGATGACCATTCTGCCCAAGCAGGAGCCATCCTTGCTGTACCTGGATCCTCTTTAAATCTCTCACCACTCATCTTTCTTTTCTCCCTCAACCCCTTCTCAGAATCCAAAGCCAATAACATGGAACTAGAAGCAGGCCAAGTTACCAGATGGGAAGGCTATGTTGATTGGAGGAGCAGGCCTGCTCTTAGAGGCAGCCATGGAGGCATGCTTGCAGCCTCCTTCGTTCTGGGTGTGGAGATTTTGGAAAATTTGGCGTTTTTGGCCAATGCCAGCAATTTGGTATTGTACTTGAAGCAGTACATGCACATGTCACCTTCGAAATCTGCCAATAATGTCACTAATTTCATGGGAACCGCCTTCCTCCTTGCACTTCTTGGTGGTTTCTTATCCGATGCATTTTTCACTTCTTATCATGTCTACCTGATAAGTGCACTTATTGAGTTCCTGGGTTTGATTGTACTCACCATACAAGCTCGTTCACCTTCACTAAAGCCACCACAATGTGATGAAGGCACCATATGTCAGGAAGTTAATGGTGGAAAAGCAGCAATGTTGTTTGCTGGCCTCTATCTGGTGGCTCTTGGAGTTGGAGGAATCAAAGGATCATTGCCAGCACATGGTGGTGAGCAGTTTGATGAAAGCACCCCAACTGGAAGAAAGCAGAGATCAACCTTCTTCAACTACTTTGTGTTCTGCCTATCATGTGGTGCCCTTATTGCTGTTACTCTTGTGGTGTGGGTTGAAGACAACAAAGGATGGGAATGGGGTTTTGCAATATCTACAATTACCATATTTGTATCCATCCCATTGTTCTTGGCAGGCTCTACTACTTACAGGAACAAGATCCCTTCAGGAAGCCCCCTCACAACCATTTCAAAGGTTCTTATTGCTGCTATACTGAATTGCTGCTGCACCAATAAAAACTCTAGCAATGCTGTTGTGAATATGGTGTCAAGCCCTTCTGATCCACACTCAGGTAGAAAAGAATCAGTGGAAGAAACTAACAAAGCAAGCACATCAGCTGAAACCCCATCAGAGTCCCTCAAATTCCTTAATGGAGCAGCTGCAAACAAGCCAGTATTTTCGTCATTAGAATGCACTGTACAACAAGTTGAAGATGTCAAGATAGTATTGAAGGTACTGCCTGTATTTGCCTGCACCATTATGCTGAACTGTTGCTTGGCTCAGTTGTCCACATTCTCTGTTGAACAAGCTGCTACAATGAACACCAAATTGGGTTCCCTCAAGGTGCCACCGGCTTCTTTACCAGTTTTCCCAGTGCTCTTTATCATGATCCTAGCACCAATATATGACCATGTTATTATCCCTTATGCTCGGAGAACGACGAAATCAGAAATGGGCATCAGTCATCTCCAAAGGATTGGAATTGGATTAGTACTCTCTATAGTTGCCATGGCTGTGGCTGCTGTTGTTGAAGTGAAAAGGAAAAGGGTGGCCACTCACTCAGGCCTAGTTGATGATGCTACCAAACCACTACCTATCTCATTCCTTTGGATTGCTTTTCAGTACTTATTCCTTGGCTCTGCTGATCTTTTCACCTTGGCTGGGTTGTTGGAGTTTTTCTTCTCAGAAGCACCAATAAGGATGAGATCTTTGGCCACATCACTTTCATGGGCCTCTTTGGCAATCGGGTACTACCTAAGTTCAGCCATTGTATCAATAGTAAACAGTGTCACTGGTAAAGGCTCCCACAAACCATGGCTATCTGGTGCCAACCTTAACCACTATCACCTAGAGAGGTTCTATTGGCTCATGTGTTTGCTGAGTGGGTTGAACTTCCTACATTACCTGTATTGGGCGGCTAGGTATAAATATAGAGGGAGAGGTACTGCTAATGAGTGA 1884 0.4448 MNGVVSCDDHSAQAGAILAVPGSSLNLSPLIFLFSLNPFSESKANNMELEAGQVTRWEGYVDWRSRPALRGSHGGMLAASFVLGVEILENLAFLANASNLVLYLKQYMHMSPSKSANNVTNFMGTAFLLALLGGFLSDAFFTSYHVYLISALIEFLGLIVLTIQARSPSLKPPQCDEGTICQEVNGGKAAMLFAGLYLVALGVGGIKGSLPAHGGEQFDESTPTGRKQRSTFFNYFVFCLSCGALIAVTLVVWVEDNKGWEWGFAISTITIFVSIPLFLAGSTTYRNKIPSGSPLTTISKVLIAAILNCCCTNKNSSNAVVNMVSSPSDPHSGRKESVEETNKASTSAETPSESLKFLNGAAANKPVFSSLECTVQQVEDVKIVLKVLPVFACTIMLNCCLAQLSTFSVEQAATMNTKLGSLKVPPASLPVFPVLFIMILAPIYDHVIIPYARRTTKSEMGISHLQRIGIGLVLSIVAMAVAAVVEVKRKRVATHSGLVDDATKPLPISFLWIAFQYLFLGSADLFTLAGLLEFFFSEAPIRMRSLATSLSWASLAIGYYLSSAIVSIVNSVTGKGSHKPWLSGANLNHYHLERFYWLMCLLSGLNFLHYLYWAARYKYRGRGTANE* 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1101 627 PANTHER PROTEIN NRT1/ PTR FAMILY 4.6 60 622 - -
Lja2g1101 627 MobiDBLite consensus disorder prediction 322 352 - -
Lja2g1101 627 Pfam POT family 147 582 IPR000109 GO:0016020|GO:0022857|GO:0055085
Lja2g1101 627 SUPERFAMILY MFS general substrate transporter 94 617 IPR036259 -
Lja2g1101 627 CDD MFS_NPF4 76 616 - -
Lja2g1101 627 Gene3D MFS general substrate transporter like domains 49 625 IPR036259 -
Lja2g1101 627 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 60 622 IPR000109 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1101 Lja-Chr2 10458690 10465022 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g1101 47 624 Organic Solute Cotransporters AT1G69850 73.083 0.0 851
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g1101 - - lja:Lj2g3v1339020.1 1196.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g1101 2 10458690 10465022 Lja2g1101 2 10458690 10465022 ECH