Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1097 ATGGAAGAACATGAACAGTGGGAGAAACCAGACAACGAAGACGACAAGCATCAACCAGAACAACGAATATGGAGTTGGGGTGCAGGAACAGAGGGCCAGTTAGGAACAGGGAAGCTTCAAGACGAGCACCACCCTCAACTCCTTCACCAACCCTCTCTGTCTTCCATCTCCTCCCTTGCATGTGGCGGCGCTCATGTCGTCGCCTTGACTTCCGACGGGAAGGTACTGTCATGGGGTAGAGGCAGTTCTGGTCAACTAGGCCATGGAGAGGTTGTTAATAACGCCTTGGAACCAAAAATTGTAACATCATTGGATGGTTACTTCATAACCCATGTTTCTGCTGGTTGGAGTCACTCTGGTTTTGTTTCAGATACTGGGTGTTTGTTCACTTGTGGGGATGGTTCGTTTGGTCAACTTGGGCATGGGGATTATGCATCACAGTGCTTTCCTGTGAGAGTTTCATGTTTTGTTGATCAGCATGTTGTGAAGGTAGCTTGTGGTATGAGACATTCCCTTGTTTTGCTGAAAGATTGTCCATTGAATCAAGTTTATGGATTTGGCTCTGGAAAGCGTGGTCAATTGGGTGTCTCCAAAGATAGGATCAAATCTATTAATCTTCCTAAAGTTGTTAGTGGATTTGAAGATGTGCAGATAGTTGAAATTGCTACAAATGGTGATCATAGTGCTGCACTATCTGTTGATGGGCATCTTTACACCTGGGGAAGAGGCTTCAAAGGCTGTGAAGATTCTCATTTTCCACAATGTTTAGACTCTACAATGAGTTTTACCAAAGCCACTTTGGGATGGAACCATGGTTTAGCTATGACTGGTGAGGGTGAGGTTTATATGCTTGGTGGCAACCACCTTGGAATGCTTAGTGATATTCAGAATGTGAGCTCAGCTAAGCAGTTACCTGTAGATTCAAGAGAAGCCAATTTGGATAAAGTCCTTGGCCTTGAAGGGGCAAAGGTTGTTGATATTGCTACGGGAGCTGAACATTCCATCCTTGTCACAGAGAATGGAGAAGTAAAGACATGGGGTTGGGGTGAGCATGGTCAACTTGGCTTGGGAGATACTTGTGACAGGATCAGTCCTGTTACAGTAAGTATCGGGTATGATCTGAATGAAGCTGCATCAATCAGAGTTTACTGCGGAAGTGGCTTCACGTTTGCTTTAACTATGCCATAA 1188 0.4495 MEEHEQWEKPDNEDDKHQPEQRIWSWGAGTEGQLGTGKLQDEHHPQLLHQPSLSSISSLACGGAHVVALTSDGKVLSWGRGSSGQLGHGEVVNNALEPKIVTSLDGYFITHVSAGWSHSGFVSDTGCLFTCGDGSFGQLGHGDYASQCFPVRVSCFVDQHVVKVACGMRHSLVLLKDCPLNQVYGFGSGKRGQLGVSKDRIKSINLPKVVSGFEDVQIVEIATNGDHSAALSVDGHLYTWGRGFKGCEDSHFPQCLDSTMSFTKATLGWNHGLAMTGEGEVYMLGGNHLGMLSDIQNVSSAKQLPVDSREANLDKVLGLEGAKVVDIATGAEHSILVTENGEVKTWGWGEHGQLGLGDTCDRISPVTVSIGYDLNEAASIRVYCGSGFTFALTMP* 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1097 395 Gene3D - 250 394 IPR009091 -
Lja2g1097 395 Gene3D - 2 249 IPR009091 -
Lja2g1097 395 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 181 234 IPR000408 -
Lja2g1097 395 PRINTS Chromosome condensation regulator RCC1 signature 336 357 IPR000408 -
Lja2g1097 395 PRINTS Chromosome condensation regulator RCC1 signature 22 38 IPR000408 -
Lja2g1097 395 PRINTS Chromosome condensation regulator RCC1 signature 75 91 IPR000408 -
Lja2g1097 395 PRINTS Chromosome condensation regulator RCC1 signature 164 180 IPR000408 -
Lja2g1097 395 PRINTS Chromosome condensation regulator RCC1 signature 56 69 IPR000408 -
Lja2g1097 395 PRINTS Chromosome condensation regulator RCC1 signature 268 286 IPR000408 -
Lja2g1097 395 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 327 337 IPR000408 -
Lja2g1097 395 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 279 340 IPR000408 -
Lja2g1097 395 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 164 174 IPR000408 -
Lja2g1097 395 Pfam Regulator of chromosome condensation (RCC1) repeat 22 69 IPR000408 -
Lja2g1097 395 Pfam Regulator of chromosome condensation (RCC1) repeat 126 174 IPR000408 -
Lja2g1097 395 Pfam Regulator of chromosome condensation (RCC1) repeat 182 231 IPR000408 -
Lja2g1097 395 Pfam Regulator of chromosome condensation (RCC1) repeat 341 392 IPR000408 -
Lja2g1097 395 Pfam Regulator of chromosome condensation (RCC1) repeat 72 121 IPR000408 -
Lja2g1097 395 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 73 125 IPR000408 -
Lja2g1097 395 PANTHER REGULATOR OF CHROMOSOME CONDENSATION 23 389 - -
Lja2g1097 395 PANTHER OS01G0777800 PROTEIN 23 389 - -
Lja2g1097 395 SUPERFAMILY RCC1/BLIP-II 21 294 IPR009091 -
Lja2g1097 395 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 21 72 IPR000408 -
Lja2g1097 395 MobiDBLite consensus disorder prediction 1 21 - -
Lja2g1097 395 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 341 395 IPR000408 -
Lja2g1097 395 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 126 177 IPR000408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1097 Lja-Chr2 10394344 10396814 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g1097 - - gmx:100793672 667.537
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g1097 2 10394344 10396814 Lja2g1097 2 10394344 10396814 ECH