Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1096 ATGCATTCGCTCACCGCACGCTCTCCTTCAATGCTCATCCCCCATTTGACTCCTTCTCTCGTTCCCCCGCACTTCGCCTCATTCAGAAGGGTGGAGAGGTTCGCGGCGTTATGCGAACCTGGTTCGGTTCTGTGGCGCGAGGGTCCCTTCAGGAATGGGAGTGTTGGGAGTGTCAGTGTCTACAAGGGTTTGTGCTCCGTGTGGCGGTGCAAGGGTAGGGACGGGAGTGGTGAGGGCGAGGCGTTCTCTTCTCTGGAGGCGGAGATTTTGGAGTTCATGCAGAAATCGGAGAACCCAGGTGCGTTTCCCACTAAGAATGAGCTTGTTGCAGCTGGGAGAGTGGATTTGGTTGAAGCCATTGTTGAAGAAGGAGGCTGGCTCGCGTATGGGTGGGATTTGAATGATGGGTTTCTTGAGAGTCACGATCTTGAAGATGGAAGTGGCAGTGAAATTGAATATAATGCAACTTGGGCTTCTGGGGTTGCTTCTACCTCTTCTACTTCTTCTTCAGCTAACTCTTCTCAACCAGCTAAATCAGTGGAATTCGAAGCTGAGGAGTCTGGAATTGAGGGAATATTGAATCGGCTGGAGAAATACAGGAGCAATTCTTTTGGAAGTGGCTTCAGAGGGAAAGAAGATAGTACTTCTTCTGAAAACAATGAAGATAGAGATGAATGGGATCATAGAACCCCAACCAATGCTGTCAAACTTGATCAGCACAAATCTCAATTAGGTACTGATAGTTTCAGAAACTCACTTAAGCCAGAGATGTGGAAGAGTTGGGTTATTCAGAGGAATGGTTCTCAGGATGCAGATTTTGAAGATGCTGAAATTGTTCCGAGTGAAGCTCCGAAAGGTGTGAGTAATGTTTCAGGAAGACCTGATATCCTCAAAACAAACAAGTTTTCTTCTGAGCTTAGAAGCAGAGAAACAGGATGGGATTCTGTTGATGGAATCCGAAATGCAAATCACATTGACATCAAATCTCGTCTCCAGCATCTGGAATCAGAGTTATCCTCTGCACTTCACGTGATGAGGTCTATCACTCCTAAAGCTTCAATGGACTTGGAGCAGAAGAGTTCTTCAGATGATCTTGCAAAGCTTTCAGATGCTTTGGAATTCCGGGAAAATGAGATCATGCATGCTCAGGACACACTGCGTTCATTACGTGCTAAGTTGTCCGTGTTGGAAGGAAAGATGGCAATGAAAAAAATGGATGCACAAAAGGCAGCGGAAGAGAAGCAGAAGAAGATTAAGAATGCCAACAAAGCTGTGAATCTTCTGAAGAGTGTTGATATAGTTTGGCCTAAACCTGCTTCAGAAGTATTTTTAGTAGGATCATTTGATGGTTGGTCCTTCAAGAGAAAGATGGAGAGGTCAGTCACTGGTGTATTCACTTTGGCCTTGTATCTGTATCCTGGAACATATGAGATCAAGTTCATTGTTGACGGTGAATGGCAAATTGATCCTTTACTTCCTATTGTTAACAACAATGGCCATGAGAATAATGTTCTAACCGTTCGTGATTGGAGGAGAGCGTGA 1542 0.452 MHSLTARSPSMLIPHLTPSLVPPHFASFRRVERFAALCEPGSVLWREGPFRNGSVGSVSVYKGLCSVWRCKGRDGSGEGEAFSSLEAEILEFMQKSENPGAFPTKNELVAAGRVDLVEAIVEEGGWLAYGWDLNDGFLESHDLEDGSGSEIEYNATWASGVASTSSTSSSANSSQPAKSVEFEAEESGIEGILNRLEKYRSNSFGSGFRGKEDSTSSENNEDRDEWDHRTPTNAVKLDQHKSQLGTDSFRNSLKPEMWKSWVIQRNGSQDADFEDAEIVPSEAPKGVSNVSGRPDILKTNKFSSELRSRETGWDSVDGIRNANHIDIKSRLQHLESELSSALHVMRSITPKASMDLEQKSSSDDLAKLSDALEFRENEIMHAQDTLRSLRAKLSVLEGKMAMKKMDAQKAAEEKQKKIKNANKAVNLLKSVDIVWPKPASEVFLVGSFDGWSFKRKMERSVTGVFTLALYLYPGTYEIKFIVDGEWQIDPLLPIVNNNGHENNVLTVRDWRRA* 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1096 513 SUPERFAMILY E set domains 431 508 IPR014756 -
Lja2g1096 513 MobiDBLite consensus disorder prediction 162 184 - -
Lja2g1096 513 PANTHER PROTEIN PTST HOMOLOG 2, CHLOROPLASTIC 60 507 - -
Lja2g1096 513 PANTHER PROTEIN PTST HOMOLOG 3, CHLOROPLASTIC 60 507 - -
Lja2g1096 513 Coils Coil 365 399 - -
Lja2g1096 513 CDD E_set_AMPKbeta_like_N 430 507 - -
Lja2g1096 513 Pfam Glycogen recognition site of AMP-activated protein kinase 431 508 IPR032640 -
Lja2g1096 513 Coils Coil 404 431 - -
Lja2g1096 513 MobiDBLite consensus disorder prediction 204 240 - -
Lja2g1096 513 Gene3D Immunoglobulins 427 509 IPR013783 -
Lja2g1096 513 MobiDBLite consensus disorder prediction 214 235 - -
Lja2g1096 513 MobiDBLite consensus disorder prediction 162 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1096 Lja-Chr2 10389748 10394164 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g1096 - - gmx:100792611 499.975
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g1096 2 10389748 10394164 Lja2g1096 2 10389748 10394164 ECH