Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1095 ATGTTGGGTGCAAGAGATAAGAGAACAAATCTCTCTGGCTTTCCTTTCTCTTCTTGGTCCCTTGTGTGCTGCAGGAGTGGCTTTAACTCTTCAAGCTCAGCACCACAAAAGGATTTACCAAACAATGAAAATCTTACTAAGAATTGTTCATCAGAATCTTCTAATAAGAAGAAGCCTGGAGGATGGAAGGCCATGCCTTTTATTTTAGGGAATGAAACATTTGAGAGGTTAGCAGCATTTGGTTTGTTTGCAAACTTTATGGTGTATTTGACAAGAGAGTTTCATTTAAACCAAGTTGATGCTTCCAACATTCTCAACATATGGTCTGGTATTACAAATTTTTTCCCCTTGGTTGGGGCCTTCATTTCTGATGCCTACGTGGGCCGCTTCCGAACCATAGCTTTTGCTTCCTTTTCTTCTCTGCTGGGGATGATCATGATAACTCTAACGGCCTGGTTACCAAAATTGCACCCTCCACCATGTTCTCCTCAGCAACTAGCATCAAATCAATGTGTTAAAGCTAGCACAACTCATGTGGGATCTCTGGGTATAGGACTCTTCTTTTTAAGCATAGGCTCCGCAGGTATAAGGCCATGCAGCATACCATTTGGTGTGGATCAATTCGACCCCACAACAGATGAAGGGAAGAAAGGGATCAACAGCTTCTTTAATTGGTACTACACCACATTCACAGTGGTGTTGTTGATCACTCAAACAGTGGTTGTCTATGTGCAAGACTCTGTTAGCTGGAAGATTGGTTTTGCCATACCAACTCTGTGCATGTTCTGTTCCATAATCTTTTTCTTTGTGGGGACAAGGATTTATGTTCATGTGAAGCCTGAAGGAAGCATTTTTTCCAGCATTGCACAAGTTCTAGTGGCTGCTTATAGAAAAAGAAATGTTAATCTTCCTAGTGAGAAGCAGGTAGATGGGGTTTTCTATGATCCTCCACTGAAGGAGAGTGCTGCTTTGTCAAAACTCCCCTTTACCAATCAATTCAGGATCTTGAATAAAGCAGCTTTGATAATGGAGGGTGAGGTAAATCCAGATGGGAGCAGAGTAAATCAGTGGAATCTTGTGAGCATCCAGCAAGTAGAAGAGATCAAATGCTTAGCAAGAATTTTCCCAATCTGGGCAGCTGGTATCCTAGGCTTCACAGCCATGGCACAACAAGGCACATTCACTGTATCACAAGCCATGAAAATGGACAGACACATAGGATCCAAATTCCAAATTCCAGCTGGTTCACTTGGAGTCATATCCTTCATCACAATAGGATTGTGGGTCCCATTCTATGACAGGTTCTTTGTCCCAGCACTAAGAAGAATCACCAAACATGAAGGGGGCATCACTCTCCTCCAGAGAATTGGAATTGGCATGGTGTTCTCTGTTCTGTCCATGATTGTAGCAGGCTTGGTGGAGAAAGTGAGAAGAGGAGTTGCAAATTCTAATCCCAACCCACTTGGCATTGCTCCAATGTCAGTGATGTGGCTGGCACCACAGCTAGTGTTGATGGGTCTGTGTGAGGCATTCAATGCAATTGGACTAATTGAATTCTTTAACAGGCAATTTCCTGAACACATGAGGAGCATTGCTAATGCATTGTTCTCATGTTCTTTTGCTCTGGCTAGCTATGTTAGCAGCATATTAGTGAGCACAGTTCATCATGCCACTAGAACACACAGTCATCCAGATTGGTTGACAAATGATATCAATGCTGGGAGGCTTGATTACTTTTACTACCTCATTGCTGGGATTGGAGTGTTGAACTTGATTTATTTTCTGTATGTTGCACAAGGATATCATTACAAGGGAAGTGTGGAACTCCAAGGTAAAGAAGATGTGGAGTTAGGTTCAAAGGGGGAATTAGATTACTATACTGGTCCTAGGTTTGAAGATTCTAAGTAA 1908 0.423 MLGARDKRTNLSGFPFSSWSLVCCRSGFNSSSSAPQKDLPNNENLTKNCSSESSNKKKPGGWKAMPFILGNETFERLAAFGLFANFMVYLTREFHLNQVDASNILNIWSGITNFFPLVGAFISDAYVGRFRTIAFASFSSLLGMIMITLTAWLPKLHPPPCSPQQLASNQCVKASTTHVGSLGIGLFFLSIGSAGIRPCSIPFGVDQFDPTTDEGKKGINSFFNWYYTTFTVVLLITQTVVVYVQDSVSWKIGFAIPTLCMFCSIIFFFVGTRIYVHVKPEGSIFSSIAQVLVAAYRKRNVNLPSEKQVDGVFYDPPLKESAALSKLPFTNQFRILNKAALIMEGEVNPDGSRVNQWNLVSIQQVEEIKCLARIFPIWAAGILGFTAMAQQGTFTVSQAMKMDRHIGSKFQIPAGSLGVISFITIGLWVPFYDRFFVPALRRITKHEGGITLLQRIGIGMVFSVLSMIVAGLVEKVRRGVANSNPNPLGIAPMSVMWLAPQLVLMGLCEAFNAIGLIEFFNRQFPEHMRSIANALFSCSFALASYVSSILVSTVHHATRTHSHPDWLTNDINAGRLDYFYYLIAGIGVLNLIYFLYVAQGYHYKGSVELQGKEDVELGSKGELDYYTGPRFEDSK* 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1095 635 Gene3D MFS general substrate transporter like domains 35 608 IPR036259 -
Lja2g1095 635 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 47 612 IPR000109 GO:0016020|GO:0022857|GO:0055085
Lja2g1095 635 PANTHER PEPTIDE/NITRATE TRANSPORTER 47 612 - -
Lja2g1095 635 MobiDBLite consensus disorder prediction 31 57 - -
Lja2g1095 635 CDD MFS_NPF1_2 65 601 - -
Lja2g1095 635 Pfam POT family 130 560 IPR000109 GO:0016020|GO:0022857|GO:0055085
Lja2g1095 635 SUPERFAMILY MFS general substrate transporter 58 598 IPR036259 -
Lja2g1095 635 MobiDBLite consensus disorder prediction 31 59 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1095 Lja-Chr2 10380995 10384754 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g1095 56 623 Organic Solute Cotransporters AT1G69870 62.369 0.0 745
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g1095 - - lja:Lj2g3v1349210.1 1263.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g1095 2 10380995 10384754 Lja2g1095 2 10380995 10384754 ECH