Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1091 ATGGGATCCAACATGTTTAATTTTGCAAATGTTGATAGATCATCAGACTCAACCAACATCATCACCTTCCATTCCACTGCTAAATGGAATGCTCATTTTGATGCCTTCAAACAAACTGACAAGCTGATGGTGATTGATTTCACAGCTAAATGGTGTGGACCCTGCAAACTCATGGACCCAGTTATCCAAGACTTTGCAGCAAAATACACAGATGTTGAGTTCATCAAGATTGATGTGGAGGAGTTATTCGAAGTGTCTCAAAGATTCCAAGTGCAGGCACTGCCAGCTTTCATACTCATTAAGAAAGGACAAGTTGTTGATAAAGTGGTGGGGGTAAGAAAGGAGGAGCTGAAAAGGATGATTGAAAATCACAGAAAGTTAACTTGTAATCATGATGCAGTGATCAAATCAGAAAGGGTCTGCAGCAGAACATTCTACCCTGACCATTACAACGGAACAAGAAAATACCTACAACTCAGATTTCAATAA 489 0.3967 MGSNMFNFANVDRSSDSTNIITFHSTAKWNAHFDAFKQTDKLMVIDFTAKWCGPCKLMDPVIQDFAAKYTDVEFIKIDVEELFEVSQRFQVQALPAFILIKKGQVVDKVVGVRKEELKRMIENHRKLTCNHDAVIKSERVCSRTFYPDHYNGTRKYLQLRFQ* 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1091 162 SUPERFAMILY Thioredoxin-like 18 125 IPR036249 -
Lja2g1091 162 ProSitePatterns Thioredoxin family active site. 44 62 IPR017937 -
Lja2g1091 162 Pfam Thioredoxin 32 122 IPR013766 -
Lja2g1091 162 PANTHER THIOREDOXIN 1 126 - -
Lja2g1091 162 PRINTS Thioredoxin family signature 51 60 - -
Lja2g1091 162 PRINTS Thioredoxin family signature 90 101 - -
Lja2g1091 162 PRINTS Thioredoxin family signature 43 51 - -
Lja2g1091 162 Gene3D Glutaredoxin 7 130 - -
Lja2g1091 162 CDD TRX_family 31 122 - -
Lja2g1091 162 ProSiteProfiles Thioredoxin domain profile. 1 126 IPR013766 -
Lja2g1091 162 PANTHER THIOREDOXIN 1 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1091 Lja-Chr2 10336910 10337736 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g1091 K03671 - gmx:100810192 188.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g1091 2 10336910 10337736 Lja2g1091 2 10336910 10337736 ECH