Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1081 ATGGAAGAAGAAGGAAAAGTAGGTACTGTCAAATTGGACAGTTGTGGATACGAGATTATAACTTCATCTCAAGCATGTCTTTCAGCAATCAACTCCTACTACCATCAGGTCCTCATCTATGGCAGAAAGAGGTCTGTGATTCTTGAAGCAGTGGGTCATGATCAAAATTGTGTCTTGGCCAACACTCTAGCTGCCCATTTTGTTTACCCTCCTGCTTCTTCTCGAGCTCGCCCTTATCTTGATGCTGCTAATTCCTTCCTGGAACATGCTACTTTATATGAGAAACTAGTTTTCGATACGATCAGTTATTTGGTATCCGAAGATAGGGACGATGATGTAGCTATTCAATTGCATTCTAAGCTTCTAGAAGAGTTCCCAAGAGATCTGGTTTCTCTAAAGAGAGCACAAGTCTTGTGCTTCTACATGGGTCGGCCTGATCTTTCTTTATCCCTTGTTCATCAGGTTCTACCTCAAAATGAAGGACAAAATTACATATATGGCATGCTTGCTTTTCCTTTGTTGGAGCTTGGACAAATGAAAGATGCTGAGAAAGCTGCCCAAAGGGGATTTGAAATCAACAAGCAAGATATCTGGTCACACCATGGATTATGTCATGTTCTTCAGTATGAGTGCCGTTTTAAAGAAGCTATTCAATTCATGGAAGAATGTTCATCATCATGGAGCTCTTCTTCATCTTTTATGTTGACACACAATTGGTGGCATGTAGCTCTTTGTTACTTAGAAGGTAATGCTCCATTGCAAAGAGTGCTCGAGATATATGACAATTATATATGGAAGGAGCTAGACAAAACTGATACTGGGTCTGCAGAAGTTTACTTAAATGCTGTGGCTCTGCTTTTGCGGCTATGTGTACGTGATGAACTGGACATGCTTGGTGATCGTCTCAAGATTCTTGCAGAGTGTCTAACTGATCAAGCAAACTGGTATATGGAGTGGCACCTTGATGTATTGACAGTGTGGGCTTTGGCAAAGACTGGAGAAATTTACAAAGCAGAAGATCTTTTAAAAGGCTTAAGAGACAGGGTTTCGAGGATGACTAAAAAGAAGCAACAATTAATGCAAAAAGGAATGAAGCTTGCGGAAGCACTTTATGCATATGGAAGAGGAAATGACAAGCATGGAGTGGAGTTACTTGGTCCAGATTTTGACGCGAATGACTATAAGATCATTGGGGCATCAGATGAGCAAGTGGATGTATTCAACGATGTTTGGTATAACATGTTGCTAAATAGTGGAGAAGCTGAGAATGCAATTGAAGTGATTGAAAAGCGAATCAAGAAGCGAGAAGGCATCCCATACACGTGGCGTTTGCTGGAGAGGGGATACAAACTAGCAAACAGGCCAGAAGCTGGAATCGCAAGCAAGCAGGCCAAGGCTTTGGAAAGTGCTTATTTTGATTAG 1422 0.4135 MEEEGKVGTVKLDSCGYEIITSSQACLSAINSYYHQVLIYGRKRSVILEAVGHDQNCVLANTLAAHFVYPPASSRARPYLDAANSFLEHATLYEKLVFDTISYLVSEDRDDDVAIQLHSKLLEEFPRDLVSLKRAQVLCFYMGRPDLSLSLVHQVLPQNEGQNYIYGMLAFPLLELGQMKDAEKAAQRGFEINKQDIWSHHGLCHVLQYECRFKEAIQFMEECSSSWSSSSSFMLTHNWWHVALCYLEGNAPLQRVLEIYDNYIWKELDKTDTGSAEVYLNAVALLLRLCVRDELDMLGDRLKILAECLTDQANWYMEWHLDVLTVWALAKTGEIYKAEDLLKGLRDRVSRMTKKKQQLMQKGMKLAEALYAYGRGNDKHGVELLGPDFDANDYKIIGASDEQVDVFNDVWYNMLLNSGEAENAIEVIEKRIKKREGIPYTWRLLERGYKLANRPEAGIASKQAKALESAYFD* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1081 473 SUPERFAMILY TPR-like 112 443 IPR011990 GO:0005515
Lja2g1081 473 CDD StaR_like 53 412 IPR033891 -
Lja2g1081 473 Coils Coil 342 362 - -
Lja2g1081 473 Gene3D Tetratricopeptide repeat domain 73 470 IPR011990 GO:0005515
Lja2g1081 473 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 38 11 471 IPR033891 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g1081 - - lja:Lj2g3v1349460.1 949.503
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g1081 2 10295110 10300135 Lja2g1081 2 10295110 10300135 ECH