Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1079 ATGGAGTTTAGCTATCCTCCTTCAGTTCCTCTTCTCTCCATTTTCCTTTTCCTGCTTCCTTCTTTGATCCTTGCTCAAATCTGCCAGAGAAACTGTGGCCAAACTCTCAAGTACCCATTCGGTAGTGGCCCCGGTTGTGGCGACCCTCGCTTCCAACCACATGTAACTTGCAGCGAACAAAGACTCACCTTCACAACTCACACAGGTTCCTACCCAATTACCTCAATTGACTACACCAATCAACTCATACACATCTCAGATCCCACCATGTCAACCTGCTCTTGCACTCTACCAAGCAAAGGCTTTGGCTTAGATGGGGACGCGCCATTCACATTCGATGACAGCACCATCTTTGCTCTCGTAGACTGTTCAATGAACTCATCATCCATATGCAAATCAAGAAGCTATGATGATGGAAGCAACTCCAAGCTTCAATGTGATCAAAGCACACCAATTTGTGATTTTTTATATTCTTGCAGGCCTATTAGTACTATCAATCTACCAATCTCCACGTGCTGCGTTTACGCGCCGGTTAACCTTGGTCCTTCGTTTGACATGGTTCTGCAGAAGCTGCAATGCGCTTCGTACACAGGATTCTACAACTACAATGATCAGCAGTCAGATCCTGAAAAGTGGAACTATGGAATAGCACTCAAGTATAAATTTAGTGTCACAAATGATTATCCTCCCTCATGTGCTGCTTGTGAAAGGAGCAATGGATTCTGTGGGTACAGTGGACCTTATAATTCATTTATCTGCAACTGTCCTAATGGGTTTAACACAACTACAGATTGTTTCTTCATATCTGATAACAATGGTTTTAGAAATGGGGTTGCTTGGTTGATTTATCCTGTGGCATGGTCTCTGGTTAGCTTCTTCTTGTAA 885 0.435 MEFSYPPSVPLLSIFLFLLPSLILAQICQRNCGQTLKYPFGSGPGCGDPRFQPHVTCSEQRLTFTTHTGSYPITSIDYTNQLIHISDPTMSTCSCTLPSKGFGLDGDAPFTFDDSTIFALVDCSMNSSSICKSRSYDDGSNSKLQCDQSTPICDFLYSCRPISTINLPISTCCVYAPVNLGPSFDMVLQKLQCASYTGFYNYNDQQSDPEKWNYGIALKYKFSVTNDYPPSCAACERSNGFCGYSGPYNSFICNCPNGFNTTTDCFFISDNNGFRNGVAWLIYPVAWSLVSFFL* 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1079 294 PANTHER WALL-ASSOCIATED RECEPTOR KINASE CARBOXY-TERMINAL PROTEIN-RELATED 11 280 - -
Lja2g1079 294 Pfam Wall-associated receptor kinase galacturonan-binding 28 87 IPR025287 GO:0030247
Lja2g1079 294 PANTHER WALL-ASSOCIATED RECEPTOR KINASE, GALACTURONAN-BINDING DOMAIN-CONTAINING PROTEIN-RELATED 11 280 - -
Lja2g1079 294 Pfam Wall-associated receptor kinase C-terminal 204 257 IPR032872 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g1079 31 124 Receptor kinase-like Gene Family AT5G02070 33.000 1.86e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g1079 - - gmx:100788392 518.464
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g1079 2 10286057 10287414 Lja2g1079 2 10286057 10287414 ECH