Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1078 ATGAAGAGGGGTATCAAGCTAGACCCATTTGGGCTACCCAACAGGCTCACACTGGTTCAAATTTTCATGGTGGTGATGCTTCTCTACATGCTCTTCATGACCTTTGAAATCCCTCTTGCTTTCAGAGCTGGATTAGCCTCTGAGAACAGTGCTTTGGGGCTTCTCACTGATGCATTGCCAGTGACAGTGCCACTGTTGCTAGAAGAGAACCACCAAATTGAAGCTTCTGTGGTTTCCACCTTGAGCTTCAATGGAACCTTCTCAGGGGACTCTGAACTTCACAAGGTGGCTAGTCACGCATGGCTTGCAGGGAAGAAGCTTTGGAGTGAGGTGGAGAGTGGGAAGGTTGAGATGTTTTCTTCCAAGTTGAAGTCTGAGAATGGTTCTGATTCGTGTCTGAATTCTGTTACGCTTTCTGGGTTTGAGTTTCGTGAGAAGTTCAAAGGGGTGATGGTGTTGCCTTGTGGGTTGACCCTTTGGTCTCATGTGACTGTTGTGGGGACTCCGCGGTGGGCTCATGCGGAGCGTGATCCTAAGATAGCGGTGGTGAGGGATGGAGATGAAGCGGTGATGGTGTCGCAGTTCATGTTGGAGTTGCAGGGGTTGAAGGCTGTGGATAAGGAGGAGCCGCCAAGGATACTGCATTTTAATCCGAGGTTGAAAGGGGATTGGAGTGGGAAGCCTGTGATTGAGCAAAACACTTGCTATAGGATGCAGTGGGGTTCTGCTCTTAGGTGTGATGGGTGGAAGTCTCGTGCGGATGAGGAAACTGTTGATGGGCAGGTTAAATGTGAAAAGTGGATTCGAGACGATGATAATCATTCTGAAGAGTGGAAGGCAACATGGTGGTTGAACAGACTGATTGGGCGAAAAAAGAAGGTGACTGTGGACTGGCCATATCCTTTTGCAGAGGGGAAATTGTTTGTTCTGACCATAAGTGCTGGCTTAGAAGGCTACCATGTTAGTGTGGATGGGAGGCATGTGACATCCTTTCCCTATCGCACCGGCTTTACTCTTGAGGATGCTACTGGACTGTCCATAAATGGGGATGTTGATGTGCACTCCATATTCGCTGCTTCCTTACCTTCTTCACATCCTAGCTTCGCTCCGCAGATGCATCTTGAATTGCTTCCTCAGTGGAAAGCTCCTCCTCTTCTCAATGTGAATGTGGAGCTTTTCATTGGCATCCTTTCTGCTGGAAACCATTTTGCTGAAAGGATGGCAGTGAGGAAGTCCTGGATGCAACATAAGCTAATCAAATCTTCAAATGTTGTGGCTCGGTTTTTTGTTGCCTTGCATGGAAGGAAGGATATGAATGTGGATATAAAGAAAGAAGCAGAGTATTTTGGTGATATTATTATGGTCCCTTACATGGATCATTATGACCTTGTTGTGTTGAAAACTATAGCTATCTGTGAATACGGGATTCGAGCAGTTGCTGCTAAGTATATTATGAAGTGTGATGATGACACATTTGTCAGAGTGGATTCTATCATAAGCGAAGCAAGACAAGTTCAAAGTGATAAAAGTCTTTACATGGGAAATATGAATTACCACCATAGGCCTCTTCGACATGGAAAATGGGCTGTAACTTATGAGGAATGGGTAGAGGAAGAGTATCCTACCTATGCTAATGGTCCAGGTTATATAGTCTCATCTGATATTGCTCAGTTCATTGTATCTGAATTTGAGAAGCGCAGATTAAAATTATTTAAAATGGAGGATGTGAGCATGGGAATGTGGGTGGAGCAGTTCAACATGTCAAGACAAGTAGAGTATGTGCACAGCTTGAAGTTCTGCCAATTTGGGTGCATTGAAGATTACTACACCGCTCATTACCAATCTCCGCGACAGATGACCTGCATGTGGGATAAATTGCAACATCAAGTGAGACCACTATGTTGCAACATGAGATGA 1917 0.4528 MKRGIKLDPFGLPNRLTLVQIFMVVMLLYMLFMTFEIPLAFRAGLASENSALGLLTDALPVTVPLLLEENHQIEASVVSTLSFNGTFSGDSELHKVASHAWLAGKKLWSEVESGKVEMFSSKLKSENGSDSCLNSVTLSGFEFREKFKGVMVLPCGLTLWSHVTVVGTPRWAHAERDPKIAVVRDGDEAVMVSQFMLELQGLKAVDKEEPPRILHFNPRLKGDWSGKPVIEQNTCYRMQWGSALRCDGWKSRADEETVDGQVKCEKWIRDDDNHSEEWKATWWLNRLIGRKKKVTVDWPYPFAEGKLFVLTISAGLEGYHVSVDGRHVTSFPYRTGFTLEDATGLSINGDVDVHSIFAASLPSSHPSFAPQMHLELLPQWKAPPLLNVNVELFIGILSAGNHFAERMAVRKSWMQHKLIKSSNVVARFFVALHGRKDMNVDIKKEAEYFGDIIMVPYMDHYDLVVLKTIAICEYGIRAVAAKYIMKCDDDTFVRVDSIISEARQVQSDKSLYMGNMNYHHRPLRHGKWAVTYEEWVEEEYPTYANGPGYIVSSDIAQFIVSEFEKRRLKLFKMEDVSMGMWVEQFNMSRQVEYVHSLKFCQFGCIEDYYTAHYQSPRQMTCMWDKLQHQVRPLCCNMR* 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1078 638 Gene3D - 385 631 - -
Lja2g1078 638 PANTHER BETA-1,3-GALACTOSYLTRANSFERASE-LIKE PROTEIN 12 638 - -
Lja2g1078 638 Pfam Galactosyltransferase 405 590 IPR002659 GO:0006486|GO:0016020|GO:0016758
Lja2g1078 638 CDD GLECT 153 357 IPR001079 GO:0030246
Lja2g1078 638 SUPERFAMILY Concanavalin A-like lectins/glucanases 151 357 IPR013320 -
Lja2g1078 638 SMART Gal_bind_lectin_2 153 358 IPR001079 GO:0030246
Lja2g1078 638 Pfam Galactoside-binding lectin 150 357 IPR001079 GO:0030246
Lja2g1078 638 Gene3D - 187 357 - -
Lja2g1078 638 ProSiteProfiles Galactoside-binding lectin (galectin) domain profile. 149 359 IPR001079 GO:0030246
Lja2g1078 638 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 12 638 IPR002659 GO:0006486|GO:0016020|GO:0016758
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1078 Lja-Chr2 10279759 10284617 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g1078 6 638 Glycosyltransferase AT1G74800 60.688 0.0 839
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g1078 K20843 - gmx:100803219 1117.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g1078 2 10279759 10284617 Lja2g1078 2 10279759 10284617 ECH
Lja2g1078 2 10279759 10284617 Lja2g1078 2 10279759 10284617 PCT