Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1077 ATGGATCAGTCACCATTCACCACTCCAAGAGGGTCTATCTCATCAAGCGTAGGAGACCCTTTAGAATTGGAGGTCAATCTCACACTCAGCGAAAAGCTCAAGGTTTTCAAAAGCTCCACCTTTGATCCCAATGCCTATGTCGCCTCCAAATCCCGCAGCATGAACGAGAAGGAGATAAGACACTTGTGTGCTTATCTTGTTGACCTGAAGAAGGCATCTGCAGAAGAAATGCGCAAAAGTGTTCTTGCTAATTACTCTGCCTTCATACGTACATCCAAAGAGATTTCAGATCTTGAGGGGGAGCTTCTTTCCATGAGAAATCTTCTATCCACTCAGGCTGCTTTGGTTCATGGTGTAGCAGACGGGTGTCAGCTTAGTTCCTTGATGACTGGAAACGAAGATTCAGACATGGACAATATACTAAATGAGAAAACAGATATATCCAAGACAGAAAAATGGCTAATAGGATATCTAGAAACCCTTGAAGTTCTATTAGCAGAGAAAAGAGTGGATGAAGCAATGGCTGCCTTGGACGAAGGAGAAAAAATGGCGCAAGAAATTAGTGAAGGGAGGACAACCTTGAGTCCAAGTTTATTCAAGGCATTGCAAGATGCCATCACTGAACACAGACAAAAATTAGCTGGTCAGCTAGCAGAAACTCTCAGCCAGGCATCAACGCGAAGCGCAGAAATTCGCTCAACGGCATTAGCATTGAAAATTCTCGGGGACGGTCCCCGTGCTCATACATTACTACTTAACTCTCACAAAGAAAAGTTGCAGCGTGGAATGCAGAGTATTCACTCCACCAGTTACGGCGGAGTTGGGGCATACACTTCTGCCCTTTCACAGCTTGTTTTTTCAACCATTTCACAAGCAGCATCAGATTCTTTGACAGTGTTTGCCGAAGAAGAACCTGCATATACTTCTGAGCTAGTAAGCTGGGCAGTTACACAATCTGAGCATTTTGCTCTTCTCCTTAAGAAACGTATACTCGCATCAACAGCTGCCGCAGGAGGTTTGAGAATCGCGTCTGAATGTGTTCATGTTTGCTTGAATCACTGCCATCTGTTAGAGGCCAGTGGGATGGCCCTTTCCCCTGTCTTACTAAAACATTTTAAACCCTTTGTTGAGCAAGCACTGAACACAAATTTGAAAAGAATTGAACAAAGTAGTGCTGCACTGGCTGCTGCAGATGATTGGTTGCTTGCTTTTGCACCAACCAGCAGGAGTTCAGGCCTACCTCCAACCTCTTCCTATAGTAACTTAAGTTCATTCCAGCCAAAGCTTTCAAGCAGCGCTCACAAATTCAACACAATGGTGCAGGAGCTTTTCGAAGATGTAGGACCTCTAGAAAGCCTGCAATTGGATGGTCTTGCATTAGAAGGCCTTCTACAAGTATTTGGCTTCTATGTCAATCTGTTAATAGATGCATTGCCAGCTTCAATTGTAACTGAGAACCTGGAAGGCTCAGGGCACAAAATCGTTAAGATTGCTGAGACTGAAGAACAGCAGATAGCATTGCTGGCTAATGCAATATTGCTAGCTGATGAGCTGCTCCCGCGAGCTGTTGTCAAGCTTTCGCATAGCACCAGGGGTGATGAGTCTCAGAGAAGGGGGCCAGACAAACAAAGGCCTCCAGAACAGCGTGAGCTGAAGAAAAGGCTACAGCGCGAAGTTGATCGTCTGAGAGACAGTTTCTGCAGGCAACATGCTCTTGAACTCATCTTCACAGAAGAAGGGGACGCACTTCTGAATGCACTAATGTATTTGAGTATGGATGATGGGAAAGTGGAGCAACCTGAATGGTTTCCTTCTCCAATTTTTCAGGAGCTTTTTGGAAAGCTTACACGAGTGGCATACATTGCAACTGATGTGTTTGTGGGAAGGGATAGGTTTGCCACTGTTTTATTGATGAGACTCGCGGAAACAGTGGTCCTGTGGCTTTCAGAGGACCAAGCCTTTTGGGAAGAGATTGAGACAGGCCCAACGCCTTTGGGTCCCCTTGGCCTTCAACAGCTTTATTTGGACATGCAATTTGTGATGATATTTTCATCCCAAGGCCGTTACCTATCTCGTCATCTGCATCAAGCTATTAAAAACATCATTGGTAGAGCTATTGATGCTGTTGCTGCTACAGGGCTAGATCCCAACAGTGTCTTGCCAGAGGATGAGTGGTTTGTAGAAGTTTCCGAAATAGCTATAAAGATGTTAACTGGGAAAGCCGCCTTTGACAATGTAGAGGGAGATGATAATAGCCCCACCGCACTCGGCTAA 2274 0.4516 MDQSPFTTPRGSISSSVGDPLELEVNLTLSEKLKVFKSSTFDPNAYVASKSRSMNEKEIRHLCAYLVDLKKASAEEMRKSVLANYSAFIRTSKEISDLEGELLSMRNLLSTQAALVHGVADGCQLSSLMTGNEDSDMDNILNEKTDISKTEKWLIGYLETLEVLLAEKRVDEAMAALDEGEKMAQEISEGRTTLSPSLFKALQDAITEHRQKLAGQLAETLSQASTRSAEIRSTALALKILGDGPRAHTLLLNSHKEKLQRGMQSIHSTSYGGVGAYTSALSQLVFSTISQAASDSLTVFAEEEPAYTSELVSWAVTQSEHFALLLKKRILASTAAAGGLRIASECVHVCLNHCHLLEASGMALSPVLLKHFKPFVEQALNTNLKRIEQSSAALAAADDWLLAFAPTSRSSGLPPTSSYSNLSSFQPKLSSSAHKFNTMVQELFEDVGPLESLQLDGLALEGLLQVFGFYVNLLIDALPASIVTENLEGSGHKIVKIAETEEQQIALLANAILLADELLPRAVVKLSHSTRGDESQRRGPDKQRPPEQRELKKRLQREVDRLRDSFCRQHALELIFTEEGDALLNALMYLSMDDGKVEQPEWFPSPIFQELFGKLTRVAYIATDVFVGRDRFATVLLMRLAETVVLWLSEDQAFWEEIETGPTPLGPLGLQQLYLDMQFVMIFSSQGRYLSRHLHQAIKNIIGRAIDAVAATGLDPNSVLPEDEWFVEVSEIAIKMLTGKAAFDNVEGDDNSPTALG* 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1077 757 PANTHER EXOCYST COMPLEX COMPONENT EXO84A 9 755 - -
Lja2g1077 757 Gene3D - 141 266 IPR042561 -
Lja2g1077 757 PANTHER EXOCYST COMPLEX COMPONENT 8 9 755 IPR033961 GO:0000145|GO:0006887
Lja2g1077 757 SUPERFAMILY Cullin repeat-like 144 380 IPR016159 -
Lja2g1077 757 Pfam Vps51/Vps67 36 114 - -
Lja2g1077 757 MobiDBLite consensus disorder prediction 529 551 - -
Lja2g1077 757 Pfam Exocyst component 84 C-terminal 152 364 IPR032403 -
Lja2g1077 757 Gene3D - 273 378 IPR042560 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1077 Lja-Chr2 10271164 10276741 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g1077 K19986 - gmx:100818886 1173.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g1077 2 10271164 10276741 Lja2g1077 2 10271164 10276741 ECH