Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1059 ATGGCGCTATCACGTTTAGCATCATCATCCTCTTCATCTTCCTCAACCGTCGGATCCAAATTCCTCAAACCCTTAACCGCCGCCTTCTCCCTCCGCCGCTCGATCTCCTCCGACTCCAACCCAATCACAATCGAAACCTCCGTCCCCTTCACCGCGCACAACTGCGACCCTCCCTCACGCTCCGTCGAAACCTCCACCGCAGAGCTTCATTCCTTCTTCCGCCAGATGGCCACGATGCGCCGCATGGAGATCGCGGCTGATTCCCTCTACAAGGCCAAACTCATCCGCGGATTCTGCCACCTCTACGACGGGCAGGAGGCCGTCGCCATCGGTATGGAGGCTGGGATCACCAAGAAGGATGCCATCATTACTGCTTACCGTGACCACTGTACCTTCCTCGGCCGTGGAGGGACGCTTCTCGAGATTTTCTCCGAGCTCATGGGGCGTGTTGATGGGTGCTCCAAAGGGAAGGGTGGTTCTATGCATTTCTACAGGAAGGAGACTAACTTCTATGGTGGTCATGGGATTGTTGGGGCTCAGGTTCCTCTTGGTTGTGGTGTGGCTTTTGCTCAGAAATACTCCAAGGATGAGGCTGTGACTTTTGCTTTGTATGGTGATGGTGCTGCCAATCAGGGACAGTTGTTTGAGGCGCTTAACATTGCTGCGCTTTGGGACCTGCCCGCCATCTTGGTCTGCGAGAATAACCATTATGGTATGGGAACTGCTGAATGGAGAGCTGCTAAGAGCCCTGCTTATTACAAGCGTGGAGATTATGTTCCTGGCTTGAAGGTAGATGGCATGGATGTTCTTGCTGTGAAACAGGCTTGCAAATTTGCAAAGGAACATGCATTGAAGAATGGACCCATTATTCTTGAAATGGACACTTACAGATACCATGGTCACTCCATGTCTGATCCTGGCAGCACTTACCGCACACGTGACGAAATTTCTGGAGTGAGACAGGAGCGTGATCCACTTGAGAGAGTAAGAAAGCTGTTAGTGTCTCATGAGGTTGCTACTGAAAAGGAGCTTAAGGACATGGAGAAGGAAGTGAGGAAAGAAGTTGATGAAGCTATTGCTAAAGCTAAGGAGAGTTCAATGCCAGACCCGTCTGATCTATATAAGAATATATATGTTAAAGGTTATGGGGTTGAGGCATTTGGTGTTGATAGGAAAGAAGTGAGAGTTACGTTGCCGTAA 1200 0.5033 MALSRLASSSSSSSSTVGSKFLKPLTAAFSLRRSISSDSNPITIETSVPFTAHNCDPPSRSVETSTAELHSFFRQMATMRRMEIAADSLYKAKLIRGFCHLYDGQEAVAIGMEAGITKKDAIITAYRDHCTFLGRGGTLLEIFSELMGRVDGCSKGKGGSMHFYRKETNFYGGHGIVGAQVPLGCGVAFAQKYSKDEAVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMGTAEWRAAKSPAYYKRGDYVPGLKVDGMDVLAVKQACKFAKEHALKNGPIILEMDTYRYHGHSMSDPGSTYRTRDEISGVRQERDPLERVRKLLVSHEVATEKELKDMEKEVRKEVDEAIAKAKESSMPDPSDLYKNIYVKGYGVEAFGVDRKEVRVTLP* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1059 399 Coils Coil 337 361 - -
Lja2g1059 399 CDD TPP_E1_PDC_ADC_BCADC 72 362 - -
Lja2g1059 399 MobiDBLite consensus disorder prediction 302 321 - -
Lja2g1059 399 Pfam Dehydrogenase E1 component 74 370 IPR001017 GO:0016624
Lja2g1059 399 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 62 380 IPR029061 -
Lja2g1059 399 PANTHER PYRUVATE DEHYDROGENASE E1 COMPONENT SUBUNIT ALPHA-2, MITOCHONDRIAL 16 399 - -
Lja2g1059 399 PANTHER PYRUVATE DEHYDROGENASE E1 COMPONENT, ALPHA SUBUNIT BACTERIAL AND ORGANELLAR 16 399 - -
Lja2g1059 399 TIGRFAM PDH_E1_alph_y: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit 68 379 IPR017597 GO:0004739|GO:0006086|GO:0043231
Lja2g1059 399 Gene3D - 31 393 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1059 Lja-Chr2 10040771 10049916 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g1059 1 399 Acyl Lipid Metabolism Gene Families AT1G24180 79.551 0.0 682
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g1059 K00161 - cit:102613187 690.263
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g1059 2 10040771 10049916 Lja2g1059 2 10040771 10049916 ECH