Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1058 ATGCTTCCTCTCCGCTGGAGCGCCGTCGTTCTCTTCCTCATTGTCTGCTGTGCCTGCCCCCTCCTCTGCATCTGCATCCGCTACTTCCCCACCACCATCAGCGCCGCCGATGGCCTTTTCGAATACTCAGAGGCGCCGGAGTATCGCAACGGAGCAGGTTGCCCTGTTTCCGGAAACAGAGACTCTGTAGTCTTGTCCTGCGACCCTTCTCTTGTCCACATCGCCATGACCCTCGACTCCGGCTACCTCCGCGGCTCCATAGCCGCAGTCCACTCCGTCCTCCGCCACTCTTCCTGCCCGGAAAACGTCTTCTTCCACTTCGTCGCCGCCGAGTTCGACCCTGCTAGTCCCCGAGTCTTGACCCGGTTGGTCAGGTCCACTTTCCCTTCTTTGAACTTCAAGGTTTACATCTTCCGGGAAGACACGGTGATCAACCTCATCTCCTCCTCCGTGCGGCAAGCTTTGGAGAATCCCTTGAACTACGCCCGGAACTACCTCGGCGACATGCTGGATCCCTGCGTGGACCGTGTTATCTACCTTGACTCCGACCTGGTCGTCGTCGACGATGTCAGCAAGCTCTGGAACGTGACGCTCGCCGAGTCAAGAGTCATCGGAGCGCCGGAGTATTGCCATGCGAACTTCACGAAGTACTTCACCGACGAGTTCTGGGTGGACCCTGTTTTGTCGCGTGTGTTCAGCTCGAGAAGGCCGTGTTACTTCAACACGGGTGTGATGGTGATGGATTTGGTGAGGTGGAGAGAAGGGAACTACAGGAAGAGGATTGAGAACTGGATGGAGTTGCAGAGGAAGAAGAGGATCTATGAACTGGGTTCTTTGCCTCCTTTTTTGCTGGTTTTTGCTGGGAATGTTGAGGCTATTGATCATAGGTGGAACCAGCATGGTCTTGGTGGGGATAATTTGAATGGGGTTTGTAGGTCTCTGCATCCTGGTCCTGTTAGCTTGTTGCATTGGAGTGGGAAAGGGAAGCCATGGGTGAGGCTTGATAACAAGCAACCTTGTCCGTTGGATCGGTTATGGGAGCCTTATGATCTGTACAAGCCACACCAGTTTCATAACAAGATGCATCAATCTTGGAGCTTCTCTTCTTCCATGTTGGTTGGATATGCTCATGATTTGCTATGA 1143 0.5381 MLPLRWSAVVLFLIVCCACPLLCICIRYFPTTISAADGLFEYSEAPEYRNGAGCPVSGNRDSVVLSCDPSLVHIAMTLDSGYLRGSIAAVHSVLRHSSCPENVFFHFVAAEFDPASPRVLTRLVRSTFPSLNFKVYIFREDTVINLISSSVRQALENPLNYARNYLGDMLDPCVDRVIYLDSDLVVVDDVSKLWNVTLAESRVIGAPEYCHANFTKYFTDEFWVDPVLSRVFSSRRPCYFNTGVMVMDLVRWREGNYRKRIENWMELQRKKRIYELGSLPPFLLVFAGNVEAIDHRWNQHGLGGDNLNGVCRSLHPGPVSLLHWSGKGKPWVRLDNKQPCPLDRLWEPYDLYKPHQFHNKMHQSWSFSSSMLVGYAHDLL* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1058 380 Pfam Glycosyl transferase family 8 73 333 IPR002495 GO:0016757
Lja2g1058 380 SUPERFAMILY Nucleotide-diphospho-sugar transferases 72 355 IPR029044 -
Lja2g1058 380 PANTHER GALACTURONOSYLTRANSFERASE-LIKE 9-RELATED 9 372 - -
Lja2g1058 380 PANTHER GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN 9 372 - -
Lja2g1058 380 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 73 349 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1058 Lja-Chr2 10027622 10029477 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g1058 2 369 Glycosyltransferase AT1G70090 73.740 0.0 568
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g1058 - - vra:106762685 650.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g1058 2 10027622 10029477 Lja2g1058 2 10027622 10029477 ECH