Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1052 ATGTCTCCCTTTCCTCTCCTCTTCCTCCTCCTCTCGATTCTACCGCTATCACTCGCTCTCAAGGTCCCCTTCAGAGTCAACGATGTTCTCCCTGTTCTCCCCCGCAGTATCTCGTGGCCCGTCCTCAACAATTTCCACAGCGCTGTGGATTTGCTTCCGTCTTTCGTTGGCTCCGTGACTCCTGATAACGCTACTGTTGAGTGGAAGGGTGCTTGCTTTTATGATAATGAAGCCAGGCTTGAGTTCACCGCCGGTGATCGGAATGATTCTGCCTTAGGGGGTGCCGTTCTCTATCTCAAGACAGAGGATGCACACAGCTGGTCCTGCATGGATCTGTATGTTTTTGCGACGCCGTACAGGATTACATGGGACTACTACTTTGCTGCACGAGAGCATACCTTGAAGTTTGATTCGTGGGAAGAGCCTGCAGAGTTGGAATATGTAAAGCAGCACGGGGTTTCTGTGTTTCTCATGCCATCGGGGATGCTGGGTACGCTGCTTTCTCTAGTTGATGTTTTGCCTCTATTCTCTAACACTGCTTGGGGTCAGAATGCCAACTTAGATTTCCTAAAGAAACACATGGGAGCTACATTTGAGAAACGCAGTCAGCCTTGGCGTGCAAATATTGATCCTGCAGATGTTCATTCCGGAGACTTTTTAGCTGTGTCAAAGATCCGTGGTAGGTGGGGAGGTTTTGAGACACTAGAAAAGTGGGTAACTGGTGCATTTGCTGGTCATACAGCGGTTTGCTTGAAGGATGAAATGGGAAATTTATGGGTTGGTGAATCTGGGCATGAGAATGAAAAGGGTGAAGAAATAATAGTGGTAATTCCATGGCATGAATGGTGGGAGTTGGCTCTTAAAGATGGCTCGAACCCTCAGATAGCCTTGCTTCCCCTGCATCCGGAGTTGCGTGCAAAATTCAACTCTACTGCAGCATGGGAGTATGCGCGGAGCATGTCTGGCAAGCCATATGGTTATCACAATATGATATTCAGTTGGATTGACACAGCAGCTGACAACTATCCTCCACCTCTTGATGCTCACTTGGTAACTTCTGTCATGTCTATGTGGACAAGAATGCAGCCAGCTTATGCTGCAAACATGTGGAATGAAGCGCTGAATAAGCGGTTAGGGACTGAGGGTTTAGATTTACATGATATTCTAGTTGAGACAGAGAAACGTGGGATTACTTTTGATGAATTGCTTACCATTCCTGAACAAGATGAATGGGTATACAGTGATGGGAAGTCAACAACATGTGTTGCCTTTATTCTTTCAATGTATAAAGAGGCTGGAATCTTTGGTCCCATTTCTAGCTCAATTCAAGTAACTGAATTCACAATTCGTGATGCATACATGCTTAGAATATTTGAGGATAACCAAACGCGCCTACCAAGATGGTGCAACAATGAGAATGACGGGCTTCCATTCTGCCAGATTCTTGGTGAATACAGGATGGAATTGCCTGGCTATAACACGTTGGATCCATATCCTAATATGAACGAGCACTGTCCTTCCCTTCCTCCCACTTATGATAGGCCTTCACAATGTTAG 1557 0.4611 MSPFPLLFLLLSILPLSLALKVPFRVNDVLPVLPRSISWPVLNNFHSAVDLLPSFVGSVTPDNATVEWKGACFYDNEARLEFTAGDRNDSALGGAVLYLKTEDAHSWSCMDLYVFATPYRITWDYYFAAREHTLKFDSWEEPAELEYVKQHGVSVFLMPSGMLGTLLSLVDVLPLFSNTAWGQNANLDFLKKHMGATFEKRSQPWRANIDPADVHSGDFLAVSKIRGRWGGFETLEKWVTGAFAGHTAVCLKDEMGNLWVGESGHENEKGEEIIVVIPWHEWWELALKDGSNPQIALLPLHPELRAKFNSTAAWEYARSMSGKPYGYHNMIFSWIDTAADNYPPPLDAHLVTSVMSMWTRMQPAYAANMWNEALNKRLGTEGLDLHDILVETEKRGITFDELLTIPEQDEWVYSDGKSTTCVAFILSMYKEAGIFGPISSSIQVTEFTIRDAYMLRIFEDNQTRLPRWCNNENDGLPFCQILGEYRMELPGYNTLDPYPNMNEHCPSLPPTYDRPSQC* 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1052 518 Gene3D endopeptidase domain like (from Nostoc punctiforme) 213 343 - -
Lja2g1052 518 PANTHER ZINC FINGER MYND DOMAIN PROTEIN 16 518 - -
Lja2g1052 518 PANTHER OS01G0793500 PROTEIN 16 518 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1052 Lja-Chr2 9989334 9993450 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g1052 - - gmx:100805887 972.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g1052 2 9989334 9993450 Lja2g1052 2 9989334 9993450 ECH