Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1041 ATGTCTGACACTTCGAGGGGTCGAGTTACCATCACTCTTGGGCGTAGCGGTCAGGTTGTGAAGAGGGATGTGTCTGGTGCTGATGTTGCTTTCTCATCTTCGGTTTCCTCGGCTGGGTCGAAACGCTCTGTAAGAGACAGAATTGGAAGTAATGCAGATAGTTCCATGTGGCATGGAAATGGCCTCGCCAGTAATAAACGACAGCGAGGAGATATGAGTTCGCGAAATGGGTTGGATGATGGGCGTATTGGCAAAGATGATCTCCGATTGAAGCTCATACAAAAAAGTGCATCTAGGCAGGCTGAGAGCAATGACAAGAAGAGGCATGGGGACCTGCGTGAAAAATTATCAAAGGCAGTTCAACCTCCTAGAGACAGTTTTAACTCAAAGCCGCGCATGCCTGAACCAAGGGAAAGAAGCTTGTTAAGGCAACTTCCCCCAGCTAGAAGCTCTGATGATTTAATGCGTATGGAATCAATGAGAAGCTCATACTCTCCTTGGACATTGGATCATATTCGGCAAAGATCACCTGATGGGTTTCCAAGTACTTCCAGGGGTATTTCCCCCCAGAGAAATGCTGGAGACCTACAGAGAAGGCCATTGAACAGGACATATGACAGTGCCAGATCAGTTCCATACGTAGGTAGGGATGTTCTTGAAACTTCAAGGCCTCCAAGTACTGCACCTGCATCTTTCATGTCACGCTCCACAATGTCAACATTGCCTCCAGTAACTGCTAAGTCTGTAGCATCTCATCCTGGCCAACTTCCTCCATCGAGCAGTGTTGCACCAAGGGCTTCATATGCGGGTGATGAACACCAATCACAGCAAACTGTTGATGGCTTGTTACATGCATTGGGACTAGGAAAATATGTCATTCTCTTCAAGGCTGAGGAAGTGGATATGACTGCATTGAAGCAAATGGGAGAAAATGACCTCAAAGAGCTTGGAATTCCTATGGGTCCGAGGAAAAAAATTCTACTCGCTCTCATGCCTCGTACCAAACGTCCACATTGA 1017 0.47 MSDTSRGRVTITLGRSGQVVKRDVSGADVAFSSSVSSAGSKRSVRDRIGSNADSSMWHGNGLASNKRQRGDMSSRNGLDDGRIGKDDLRLKLIQKSASRQAESNDKKRHGDLREKLSKAVQPPRDSFNSKPRMPEPRERSLLRQLPPARSSDDLMRMESMRSSYSPWTLDHIRQRSPDGFPSTSRGISPQRNAGDLQRRPLNRTYDSARSVPYVGRDVLETSRPPSTAPASFMSRSTMSTLPPVTAKSVASHPGQLPPSSSVAPRASYAGDEHQSQQTVDGLLHALGLGKYVILFKAEEVDMTALKQMGENDLKELGIPMGPRKKILLALMPRTKRPH* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1041 338 ProSiteProfiles SAM domain profile. 274 337 IPR001660 GO:0005515
Lja2g1041 338 MobiDBLite consensus disorder prediction 171 199 - -
Lja2g1041 338 SUPERFAMILY SAM/Pointed domain 275 330 IPR013761 -
Lja2g1041 338 MobiDBLite consensus disorder prediction 32 71 - -
Lja2g1041 338 MobiDBLite consensus disorder prediction 219 238 - -
Lja2g1041 338 MobiDBLite consensus disorder prediction 32 83 - -
Lja2g1041 338 MobiDBLite consensus disorder prediction 245 275 - -
Lja2g1041 338 SMART SAM_4 271 336 IPR001660 GO:0005515
Lja2g1041 338 MobiDBLite consensus disorder prediction 177 197 - -
Lja2g1041 338 MobiDBLite consensus disorder prediction 245 262 - -
Lja2g1041 338 MobiDBLite consensus disorder prediction 224 238 - -
Lja2g1041 338 PANTHER OSJNBA0060P14.15 PROTEIN 1 335 - -
Lja2g1041 338 MobiDBLite consensus disorder prediction 95 156 - -
Lja2g1041 338 PANTHER PA-PL1 PHOSPHOLIPASE FAMILY 1 335 - -
Lja2g1041 338 Gene3D - 276 337 IPR013761 -
Lja2g1041 338 MobiDBLite consensus disorder prediction 100 120 - -
Lja2g1041 338 Pfam SAM domain (Sterile alpha motif) 273 330 IPR001660 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1041 Lja-Chr2 9797082 9804698 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g1041 245 330 Glycosyltransferase AT3G07170 47.674 1.28e-15 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g1041 - - gmx:100797199 490.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g1041 2 9797082 9804698 Lja2g1041 2 9797082 9804698 ECH