Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1001 ATGGGAACCCGTGGAAAGCTTGAGGTAGACATTGATCTGAAGTCAAATGCAGACAAGTACTGGTTAACCCTCAGGGACTCCACAACCATATTCCCTAAGGCCTTCCCCCATGATTACAAAAGCATTGAGATTCTTGAGGGTGATGGCAAGGCTGCTGGTTCTGTCCGCCACATAACTTATGCTGAAGGGTCACCACTTGTGAAATCATCGACAGAGAAGATTGATGCTGCTGATGATGAAAAGAAGACAGTAAGCTATGCTGTGATTGATGGTGAACTCCTGCAGTACTACAAAAAATTCAAAGGGACAATCTCTGTGATAGCCGTTGGGGAAGGAAGCGAGGTGAAATGGAGCGCTGAATATGAAAAAGCAAGCACTGATATTCCTGATCCATCTGTTGTCAAGGACTTTGCAGTCAAGAACTTCCTTGAGGTGGATGAATATGTTCTCCAACAAGCATAG 462 0.4481 MGTRGKLEVDIDLKSNADKYWLTLRDSTTIFPKAFPHDYKSIEILEGDGKAAGSVRHITYAEGSPLVKSSTEKIDAADDEKKTVSYAVIDGELLQYYKKFKGTISVIAVGEGSEVKWSAEYEKASTDIPDPSVVKDFAVKNFLEVDEYVLQQA* 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1001 153 PANTHER MLP-LIKE PROTEIN 423 6 150 - -
Lja2g1001 153 Pfam Pathogenesis-related protein Bet v 1 family 4 151 IPR000916 GO:0006952
Lja2g1001 153 SMART Bet_v_1_2 2 152 IPR000916 GO:0006952
Lja2g1001 153 SUPERFAMILY Bet v1-like 1 151 - -
Lja2g1001 153 Gene3D - 1 152 IPR023393 -
Lja2g1001 153 CDD Bet_v1-like 5 150 - -
Lja2g1001 153 PANTHER MLP-LIKE PROTEIN 423 6 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1001 Lja-Chr2 9441455 9442702 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g1001 - - mtr:MTR_5g035010 244.588
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g1001 2 9441455 9442702 Lja2g1001 2 9441455 9442702 ECH