Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0979 ATGAACAAACAACACACCTTCTTCTGTTTCTTTATCCTCTTCTTCTTCTTCTCAAATCTCAATGTTGGTTCCGCCGCCGATGCGGTGGCCGGAGACAAAAATCCCTTCACCCCGAAGGCCTATGTGGTGCGGTATTGGGACAAGGAGATCCGCAACGGGCTGCCCAAGCCGTCGTTCCTGTTGACTAAAGCGTCGCCGCTGAGCGCAGTGGATTCCGCCTCGTTCGCCAAGCTAGCTGCCGGCGGCGCACTCTCCACGCGCCTGCCGGAGTTTTGCTCCGCCGCGAACCTCCTCTGCTTCCCGGAAGTTTCCCCCAGCCTCGAGAAGCACGACAAGGACGCGAGCTTCGCCGTGTACCGGGACAAGAACTTCACCAACTACGGAACGGGTCGACCCGGCGGGGTCGACTCGTTCAAGAACTACTCCGACGGGGAGAATATTCCGGTGAACGATTTCCGCCGCTACAGCCGCAACTCCGCCGGACACAAGGAGAGTTTCCTCAGCTATGGCTCCGACGGCAACGTGGTGGACCAGAGCTTCCACACCTACGCCGCCGGAGCCACCGGCGGCGCTGGCGAGTTCAAGCGCTACTCCGACCAAGTCAACGTCCCTGACCTCCGATTCTCCTCCTACTCCGACGACGCCAACGGGAGAACCCAATCGTTCACCGCCTACTCAGAAAACGGCAATGCCGGAGACCAATCGTTCACCAGCTACGGCAAGAACGGAAACGGCCCCACCGACGAGTTCACCTCCTATGGAAAAAGCTCCAACGTCGTCGGGTCCGGATTCTCCAACTACGCCGAGAACGCCAACGCCGCCAACGACACGTTCAAAGGCTACGGCATCGACATGAACAACCCCACCAACACGTTCACCAACTACGCCTCCGGCGGCAACGGCGCCACCGAGCATTTCACCAACTACCGCGACCAAGCCAACGTCGGCGCCGACTCCTTCACCTCCTACGCCAAATCCGCCAACGCCGCCGATGTCGGTTTCACCAACTACGGCAAATCGTTCAACGAAGGAACCGACACATTCACCGGCTACGCCAAAAGCGCCAAGGGCGAAACCAAGGTGGATTTCAAAGGCTACGGCGTCAACAACACGTTCAAGGAGTACACGAAAGACGGTGTATCATTCTCCCAATACACCAACGTGAGCACTTCACTGGAAAATCAGAAGCTGCTGAAAACTCCGGCGAGTGGCAATTTGGTAAAAAGATGGGTTGAACCGGGCAAATTCTTTAGAGAGAAAACACTGAAAGAAGGAACTGTTATCCCTATGCCAGACATTAGAGATAAAATGCCTAAAAGGTCGTTTTTACCCCGGAGCATTCTCGCGAAATTACCATTCTCAACCTCGAAGATTTCTGAGCTGAAACAAATGTTCAAAGCTTCTGATAATGGCTCCATGGAGAAGATGATGAGGGATTCACTGCAAGAGTGTGAGAGAGTCCCTAGCCGGGGTGAGACCAAGCGGTGTGTGGGGTCCATTGAGGATATGGTTGATTTCGCCACCTCTGTTCTCGGCCGCAATGTGGTGGTGAGAACCACCGAGAATGTAAACGGGTCGAACAAGAAAGTGATGGTGGGTCGGGTTCAAGGGGTCAACGGTGGGAAGGTGACCCGGTCGGTTTCTTGCCACCAGAGCTTGTTTCCTTACCTTCTCTACTACTGTCACTCTCTTCCTAAGGTTCGGGTCTACCAAGCGGATCTTCTTGACCCGAATACCAAGGCCAAGATCAACCATGGTGTTGCTGTTTGTCATGTGGATACCTCTGATTGGAGCCCCGCCCATGGAGCTTTTCTCGCTCTCGGGTCGGGTCCGGGTCGGATTGAGGTTTGTCACTGGATCTTTGAGAATGATATGAGCTGGGCTACTGCTGATTGA 1896 0.5496 MNKQHTFFCFFILFFFFSNLNVGSAADAVAGDKNPFTPKAYVVRYWDKEIRNGLPKPSFLLTKASPLSAVDSASFAKLAAGGALSTRLPEFCSAANLLCFPEVSPSLEKHDKDASFAVYRDKNFTNYGTGRPGGVDSFKNYSDGENIPVNDFRRYSRNSAGHKESFLSYGSDGNVVDQSFHTYAAGATGGAGEFKRYSDQVNVPDLRFSSYSDDANGRTQSFTAYSENGNAGDQSFTSYGKNGNGPTDEFTSYGKSSNVVGSGFSNYAENANAANDTFKGYGIDMNNPTNTFTNYASGGNGATEHFTNYRDQANVGADSFTSYAKSANAADVGFTNYGKSFNEGTDTFTGYAKSAKGETKVDFKGYGVNNTFKEYTKDGVSFSQYTNVSTSLENQKLLKTPASGNLVKRWVEPGKFFREKTLKEGTVIPMPDIRDKMPKRSFLPRSILAKLPFSTSKISELKQMFKASDNGSMEKMMRDSLQECERVPSRGETKRCVGSIEDMVDFATSVLGRNVVVRTTENVNGSNKKVMVGRVQGVNGGKVTRSVSCHQSLFPYLLYYCHSLPKVRVYQADLLDPNTKAKINHGVAVCHVDTSDWSPAHGAFLALGSGPGRIEVCHWIFENDMSWATAD* 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0979 631 PANTHER POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 10 631 - -
Lja2g0979 631 Pfam BURP domain 416 628 IPR004873 -
Lja2g0979 631 ProSiteProfiles BURP domain profile. 416 630 IPR004873 -
Lja2g0979 631 PANTHER POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 10 631 - -
Lja2g0979 631 SMART BURP_2 414 630 IPR004873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0979 Lja-Chr2 9192698 9195244 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0979 - - gmx:100776642 1014.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0979 2 9192698 9195244 Lja2g0979 2 9192698 9195244 ECH