Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0977 ATGGCAGATTCAAAGCCCGGATTGAGGAAGCCTGTGTTTACCAAGGTTGATCAGCTTCGCCCAGGGACCAGTGGGCACACTTTAACCTTGAAGGTGGTCAATACTAAGATGGTGGTGCAAAAAGGTCGTGCTGATGGTGCTCAATCCCGTCAAATGCGACTTGCTGAATGTTTGGTTGGTGATGAGACTGGAATGATCATATTCACTGCTAGAAATGATCAAGTGGATTTGATGAAAGAGGGCAGCACTGTAGTCATGCGCAATGCCAAAATTGACATGTACAAAGGATCAATGAGACTCGCTGTGGACAAGTGGGGCCGTGTTGAGGTCGCAGAACCTGCTAGTTTCACTGTTAAGGAAGATAATAACTTGTCCCTGATTGAGTACGAGCTGGTGAATGTTGTGGAATGA 411 0.4647 MADSKPGLRKPVFTKVDQLRPGTSGHTLTLKVVNTKMVVQKGRADGAQSRQMRLAECLVGDETGMIIFTARNDQVDLMKEGSTVVMRNAKIDMYKGSMRLAVDKWGRVEVAEPASFTVKEDNNLSLIEYELVNVVE* 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0977 136 Gene3D - 23 126 IPR012340 -
Lja2g0977 136 PANTHER OS05G0244600 PROTEIN 1 136 - -
Lja2g0977 136 PANTHER BNAA07G09820D PROTEIN 1 136 - -
Lja2g0977 136 SUPERFAMILY Nucleic acid-binding proteins 7 134 IPR012340 -
Lja2g0977 136 CDD SoSSB_OBF 27 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0977 Lja-Chr2 9168366 9170881 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0977 - - jcu:105644590 253.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0977 2 9168366 9170881 Lja2g0977 2 9168366 9170881 ECH