Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0974 ATGAAAGAAAATATGGATATTGATCATCCTTACCAGATGTTCAAACAGTTCAATGAAGAACAGGATGCAAGTAACATGAAGATTAGAAATAATGAATCAGCAGAAAGCAGAGTTCAAAGCTTAAGGGTCACTGAAGAGGAAACAGCTAGGGTTTCATCATGTCAATTAGGAGATTTGAGTAGTAGGTTGTGCCACTGCTCACTGAATTATTTAAAACCAGTTGCTGTTAAGGAAGCCTATCGACGCTTCTTAGATAATAAAGTAACTCAGTCCTCACCTTCCCCTGCACTCTGCTTTGTGAAGACAGTGCCTCAAGATACACAAAATTCTCATATTACAGCTTTTAATTCAGGAGATGGATCCTCGACGTCAGATAATGAATCAACTTCATCAAATACCGTTCGGGATGTACATATTTCAATGCGATTGATGGAGGATTTTCTTGATCTTGCTAAGGAAAATACAGAAAAGGATCTGGAAACTTGTGGTATACTTGGTGCCTTCCTTGAGAAGGGAACCCTCTATATGACTACTCTAATCATACCAAAGCAGGAATCAGCTTCTAATTCTTGTCAAGCTACAAATGAGGAGGAAGTTTTCAAAATCCTAAATGAAAGATCACTTTATCCTGTAGGATGGATCCATACACATCCTTCTCAGAGTTGTTTCATGTCATCGGTGGATCTGCATACTCAACACTCATACCAGATGATGATTCCTGAGGCGTTTGCTATTGTTTTGGCACCAACTGATACCTCAAGGAGCTGTGGACTATTTCGCCTAACAGACCCTGATGGAATGGAGATTCTGAAAAATTGCCAGGAGAAAGGATTCCATCCACACAAAGAACCAGATAATGGGAACCCTGTGTATGAACACTGCTCCAATGTGTACAAAAACTCCAATCTAAGGTTTGAAATCTTTGATTTACGCTAA 936 0.3942 MKENMDIDHPYQMFKQFNEEQDASNMKIRNNESAESRVQSLRVTEEETARVSSCQLGDLSSRLCHCSLNYLKPVAVKEAYRRFLDNKVTQSSPSPALCFVKTVPQDTQNSHITAFNSGDGSSTSDNESTSSNTVRDVHISMRLMEDFLDLAKENTEKDLETCGILGAFLEKGTLYMTTLIIPKQESASNSCQATNEEEVFKILNERSLYPVGWIHTHPSQSCFMSSVDLHTQHSYQMMIPEAFAIVLAPTDTSRSCGLFRLTDPDGMEILKNCQEKGFHPHKEPDNGNPVYEHCSNVYKNSNLRFEIFDLR* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0974 311 PANTHER AMSH-LIKE PROTEASE 22 311 - -
Lja2g0974 311 Gene3D Cytidine Deaminase, domain 2 115 311 - -
Lja2g0974 311 ProSiteProfiles MPN domain profile. 137 267 IPR037518 -
Lja2g0974 311 PANTHER FI19924P1 22 311 - -
Lja2g0974 311 SUPERFAMILY JAB1/MPN domain 137 267 - -
Lja2g0974 311 SMART pad1_6 136 264 IPR000555 GO:0005515|GO:0008233|GO:0008237
Lja2g0974 311 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 133 241 IPR000555 GO:0005515|GO:0008233|GO:0008237
Lja2g0974 311 CDD MPN_AMSH_like 135 311 IPR044098 GO:0016579|GO:0061578|GO:0070536|GO:0140492
Lja2g0974 311 MobiDBLite consensus disorder prediction 110 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0974 Lja-Chr2 9141737 9146577 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0974 K11866 - gmx:100807282 456.447
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0974 2 9141737 9146577 Lja2g0974 2 9141737 9146577 ECH