Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0958 ATGGCAGCTCAATGGGAATTACCAGAAGAAGCACCCATCCATGGAGATGTCTTAGAGACAATCCTCTCACACGTGCCACTCATCCACTTGGTCCCCGCTTGTCACGTGTCAAACACATGGAAGCATGCGGTGTTTTCCTCACTCGCTCACACCAGAACCATTAAGCCATGGCTAATCATCCTCACACAGAGCACTCGTGCCTCGCACGTGATAACCGCGCACGCTTACGATCCTCGCTCGCACGTGTGGGTGGAGATGAAACTACCCCACCCTTTGAAGGGCCACCCCTCCGCCACCGCCGCCGTCCGATCATCTCACTCCACGCTGCTCTACACTCTCTCCCCCGCCGAATTCGCCTTCTCCATCGACGCGCTGCATCTCGACTGGCACCACGCTCCCGCCCCACGCGTGTGGCGTACTGACCCGATCGTGGCGCGAGTTGGACAGCGCGTGGTGGTAGCTGGCGGCGCGTGTGACTTCGAGGATGACCCGCTGGCGGTGGAGATGTATGACATGGAGAGTAACACCTGGGTGATGTGCCAGTCCATGCCGGCTATGCTGAAGGGCTCGTCGGGGTCGACGTGGCTTTCGGTCGCCGTCGCCGGAGAGGAGGTGCTTGTGACGGAGGAAAGCTCCGGTATGACGTTTTGTTTTGACACGGTTTCGATGAAGTGGGATGGGCCGTATGATCTTTGTCCTGACCAGAGTGTTGGTTACTGCGTTACGGGGATGTTAGGGAAGAGGTTGATGGTGGCGGGGGTGGTGGGGGACGGTGAGGACGTGAAAGCGGTGAAGCTGTGGGCGGTTAAGGGGGGGTTGGGTTCGGGAATGACGGAGGAAGTGGGTGAGATGCCGGAGGAGCTGTTGGAGAAGTTCAAAGGTGATTCTGATGAGTTGGGTTCGTTGGAGGTGACTTGGGTTGGGAATTTTGTTTACTTGCGGAACACGTTGGAGATTGAGGAGTTGGTGATGTGTGAAGTTGTGAATGGGAGTAGGTGTGAGTGGAGGAGTGTGCGCAACGCCGCTGTGGATGGCGGCACAAGGATGGTGGTTTGCGGCAGCGAAGTGCGCTTGGAGGATCTGCAAAGCGCGATGGTTTCCGGAATTCAAACATGTCGTACAAAATAA 1128 0.5709 MAAQWELPEEAPIHGDVLETILSHVPLIHLVPACHVSNTWKHAVFSSLAHTRTIKPWLIILTQSTRASHVITAHAYDPRSHVWVEMKLPHPLKGHPSATAAVRSSHSTLLYTLSPAEFAFSIDALHLDWHHAPAPRVWRTDPIVARVGQRVVVAGGACDFEDDPLAVEMYDMESNTWVMCQSMPAMLKGSSGSTWLSVAVAGEEVLVTEESSGMTFCFDTVSMKWDGPYDLCPDQSVGYCVTGMLGKRLMVAGVVGDGEDVKAVKLWAVKGGLGSGMTEEVGEMPEELLEKFKGDSDELGSLEVTWVGNFVYLRNTLEIEELVMCEVVNGSRCEWRSVRNAAVDGGTRMVVCGSEVRLEDLQSAMVSGIQTCRTK* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0958 375 Gene3D - 36 279 IPR015915 GO:0005515
Lja2g0958 375 SUPERFAMILY Kelch motif 56 267 IPR015915 GO:0005515
Lja2g0958 375 Pfam F-box domain 7 46 IPR001810 GO:0005515
Lja2g0958 375 PANTHER KELCH REPEAT-CONTAINING F-BOX-LIKE PROTEIN 9 365 - -
Lja2g0958 375 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP4 9 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0958 Lja-Chr2 9020730 9022469 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0958 - - gmx:100819427 473.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0958 2 9020730 9022469 Lja2g0958 2 9020730 9022469 ECH