Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0953 ATGATAACTCTTTCCCCTTGTTGCAATTTCCGACCAATCTGCGCTAACGAGCGCCAAGCGCTGTTTAACCGCATTGCGCCTGTCTATGATAACCTGAATGATTTGCTGAGTCTGGGTCAACACCGAATTTGGAAGCGAATGGCTGTTTCTTGGTCTGGAGCTAAAATGGGTCACCGTGTATTGGATGTGTGCTGTGGAAGTGGGGATTTAGCATTGCTCTTGTCTGAGAAAGTTGGCTCCAATGGCAAGGTGATTGGTCTTGATTTCTCGGAAGAGCAGCTATCCGTTGCCGCATCACGACAGAATTCACGTACGAAGAACTGCTTCACGAATATTGAGTGGGTTGAAGGTGACGCTCTTGACTTGCCATTTGATGATGGTTGGTTTGATGCTATCACTATGGGATATGGTCTTCGAAATGTGGTTGATAAGCGTAAAGCCATGCAGGAAATATTACGTGTCCTTAAAGCTGGCTCTAGAGTGTCTATCCTCGACTTCAATAAAAGCAATGAGTTACTAACTTCTTCAATCACGGAATTGTTGATTGATAATATTGTTGTCCCAGTAGCCTCCGTTTATGGCCTTTCAGAGGACTACAGATATCTCAAGAGTTCAATAAGAGAATTTTTAACAGGGAAGGAATTAGAGGAACTTGCTTTAGAAGTAGGATTTTCTACTGCCAGACATTATGAGATCAGTGGAGGCCTCATGGGGTGCTTGGTAGCCAAACGTTAG 735 0.4408 MITLSPCCNFRPICANERQALFNRIAPVYDNLNDLLSLGQHRIWKRMAVSWSGAKMGHRVLDVCCGSGDLALLLSEKVGSNGKVIGLDFSEEQLSVAASRQNSRTKNCFTNIEWVEGDALDLPFDDGWFDAITMGYGLRNVVDKRKAMQEILRVLKAGSRVSILDFNKSNELLTSSITELLIDNIVVPVASVYGLSEDYRYLKSSIREFLTGKELEELALEVGFSTARHYEISGGLMGCLVAKR* 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0953 244 PANTHER METHYLTRANSFERASE 14 244 - -
Lja2g0953 244 ProSitePatterns ubiE/COQ5 methyltransferase family signature 1. 29 44 IPR023576 GO:0008168
Lja2g0953 244 CDD AdoMet_MTases 59 163 - -
Lja2g0953 244 Pfam ubiE/COQ5 methyltransferase family 19 238 IPR004033 GO:0008168
Lja2g0953 244 TIGRFAM MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 20 243 IPR004033 GO:0008168
Lja2g0953 244 Gene3D Vaccinia Virus protein VP39 24 244 IPR029063 -
Lja2g0953 244 PANTHER 2-PHYTYL-1,4-BETA-NAPHTHOQUINONE METHYLTRANSFERASE, CHLOROPLASTIC 14 244 - -
Lja2g0953 244 Hamap Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 15 244 IPR004033 GO:0008168
Lja2g0953 244 ProSiteProfiles UbiE family SAM-binding methyltransferase profile. 13 244 IPR004033 GO:0008168
Lja2g0953 244 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 18 236 IPR029063 -
Lja2g0953 244 Hamap 2-phytyl-1,4-naphtoquinone methyltransferase [menG]. 17 244 IPR032904 GO:0042372|GO:0052624
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0953 Lja-Chr2 8945816 8948361 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g0953 55 181 Acyl Lipid Metabolism Gene Families AT3G18000 26.772 2.54e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0953 K23095 - gmx:100789470 401.364
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0953 2 8945816 8948361 Lja2g0953 2 8945816 8948361 ECH