Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0949 ATGAACTTGGATTCAGCAATAGAAACAAGGAAGAGAAATTTCTCAAGCATGGATTTTAGCTGGTGTTTGAGCTCTCCAATCATTTCAACCTTTGTACATTTTCTTCTTGTTGCTTCTCTGTTTTGTCCTGTTCGTTCCTCAGAAATGAGGAACACCCCAGATGCCAACAACACTTTTCGGCCACAAGAAGAGGTTCATAAATTGAACATCATAAGAAGTCGTCTTCAGCAAATCAACAAGCCTTCTATTAAGACAATTCAGAGTCCTGATGGTGATATCATAGATTGTGTTGTATCTCATCAGCAACCAGCTTTTGATCACCCTCTATTGAAAGGACAAAGACCACTGGATCTTCCAGAAAGACCCAAAAGCCATAATCATAAGGACATGTTGAATGAAAATTTTCAGCTATGGACTTTGTCAGGGGAATCATGTCCAGAAGGTACAGTTCCAATCAGAAGAACAACAGAACAAGATATGTTAAGGGCTAGCTCTGTCAGCAGGTTTGGAAGAAAATTAAGAAGAAGAGTTAGAAGGGACACAAACAGCAATGGACATGAGCATGCAGTTGGGTATGTGAGTGGACAACAGTACTATGGAGCAAAGGCTAGCATAAACGTGTGGGCCCCACGCGTGGCAAATCAATATGAATTCAGCTTGTCCCAAATGTGGGTCATCTCTGGTTCATTTGGGGATGATCTCAACACCATTGAAGCTGGTTGGCAGGTCAGCCCTGAGCTCTATGGGGACAGTTACCCTAGATTCTTTACTTATTGGACGAGTGATGCATATCAAGCAACTGGATGCTACAATTTACTGTGTTCAGGCTTTGTTCAAACTAATAATAGAATTGCAATTGGAGCTGCAATCTCTCCAACTTCTTCATATGGAGGAGGACAATTTGATATTAGCTTGCTCATCTGGAAGGACCCAAAGCATGGGAACTGGTGGCTTGAATTTGGAGCCGGAATATTAGTTGGGTACTGGCCATCATTCTTGTTCACTCACTTAAGAGATCATGCAAGCATGGTTCAATTTGGTGGAGAAATTGTGAATTCAAGAACTTCAGGGCCTCACACATCAACCCAAATGGGCAGTGGGCATTTTGCAGGAGAAGGTTTTGGAAAAGCTTCTTACTTTAGAAACTTGCAAGTTGTGGATTGGGATAATAACTTGATACCCTTGTCAAATCTCAAGGTCCTAGCGGATCACTCGAATTGCTATGATATTCAAGGAGGGATTAACAAGGTTTGGGGGAATTACTTTTACTATGGTGGACCTGGGAGGAATGTGAGATGTCCCTAA 1305 0.4192 MNLDSAIETRKRNFSSMDFSWCLSSPIISTFVHFLLVASLFCPVRSSEMRNTPDANNTFRPQEEVHKLNIIRSRLQQINKPSIKTIQSPDGDIIDCVVSHQQPAFDHPLLKGQRPLDLPERPKSHNHKDMLNENFQLWTLSGESCPEGTVPIRRTTEQDMLRASSVSRFGRKLRRRVRRDTNSNGHEHAVGYVSGQQYYGAKASINVWAPRVANQYEFSLSQMWVISGSFGDDLNTIEAGWQVSPELYGDSYPRFFTYWTSDAYQATGCYNLLCSGFVQTNNRIAIGAAISPTSSYGGGQFDISLLIWKDPKHGNWWLEFGAGILVGYWPSFLFTHLRDHASMVQFGGEIVNSRTSGPHTSTQMGSGHFAGEGFGKASYFRNLQVVDWDNNLIPLSNLKVLADHSNCYDIQGGINKVWGNYFYYGGPGRNVRCP* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0949 434 Pfam Neprosin 216 427 IPR004314 -
Lja2g0949 434 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 25 434 - -
Lja2g0949 434 Pfam Neprosin activation peptide 85 192 IPR025521 -
Lja2g0949 434 Gene3D - 208 322 - -
Lja2g0949 434 PANTHER - 25 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0949 Lja-Chr2 8905415 8909797 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0949 - - gmx:100776135 802.742
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0949 2 8905415 8909797 Lja2g0949 2 8905415 8909797 ECH