Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0910 ATGGAGCTTGGCAACCACAATCATGCAGCTGCTACACTTGTTACATTTTGCTTACTGTTCTCCTTCACTTTCAGCCATGCTTCTTCTTTCTACCCAGAATTGAATCCTATAAAACCGAGGCACTCACGTCTTCTCAGGAGTGCTGTGCAGCGTGAAACTCCAACATCTCAACTTTCTGAAATATGGTCACCTTTGGAAAACCAAGGATGGAAACCGGTTGAGTCTAGAAATAAGCCAACATTACCAGAGAAGTCCGAGGGATACATCCAGGTATTTCTTGATGGAGGTTTGAACCAGCAAAGGATGGGGATATGTGATGCAGTTGCTGTAGCAAAGATACTGAATGCAACTCTTGTGATCCCATACCTTGAATTAAATCCTGTATGGCGAGATTCAAGCTCCTTCATGGATATATTTGATGTGGATCATTTCATTGATGTATTGAAGGATGATATTTCTATAGTTAAAGAGCTTCCTGAAGAGTACTCGTGGAGCACAAGGGAGTACTATGCCATTGCTGTTCGCGATACCAGAATCAAGAATTCACCTGTGCATGCATCGGCCAACTGGTATCTGGAAAATGTTTTGCCTGTCTTGCAGAGTTTTGGTATTGCTGCAATCTCTCCATTTTCTCACCGCTTGAGTTTTGACAACTTGCCTATGGATATCCAACACCTGCGCTGTAAAGTCAACTTTCAAGCTTTAGAATTTGTTCCTCATATTAGAACACTTGGAGATGCCCTCATCAACCGCCTTCGCTCTCCTCAAGGCTCTGCTGGAGAAATCGGTTCCAACTATCTTCAAGAAGTCACTGATGGAGGTGATAGTAAAAATGCAGGGAAATTCGTTGTTCTGCACCTCCGATTTGATAAGGATATGGCAGCTCATTCAGCCTGTGATTTTGGTGGGGGAAAAGCTGAGAAATTTGCCCTTGCAAAGTATAGACAGGTGATTTGGCAGGGAAGGCTTCTCAATTCTCAATTCACTGATGAAGAGTTGAGGAGTCAGGGTCGTTGCCCAATGACTCCAGAAGAGGTTGGATTGTTGCTAGCAGCTTTGGGATTTGACAACAGCACGCGTTTATATCTTGCTTCTCATAAGGTCTATGGTGGAGAAGCAAGGATTTCAACTTTGAGGCAATTGTTTCCTCTGATGGAAGACAAAAAGAGCCTAGCTTCATCTTATGAGCGTTTTCAAATAAAGGGCAAAGCTTCTCTATTAGCTGCACTTGACTACTATGTTGGCCTGCATAGTGACATCTTCATCTCTGCTTCTCCAGGAAATATGCACAATGCAGTGGTTGGACACCGCACTTACTTGAACTTAAAGACTATAAGGCCAAACCTGGTATTAATGGGTCAACTCTTCCTGAATAAAACCATGGAGTGGTCAGAGTTTGAGCATGCTGTGGTCGAGGGTCACCAAAATAGACAAGGTCAACTGAGGCTGAGAAAGCCCAAACAGTCCATATACACATATCCTGCTCCTGATTGCATGTGCCAAGCTTAA 1509 0.4347 MELGNHNHAAATLVTFCLLFSFTFSHASSFYPELNPIKPRHSRLLRSAVQRETPTSQLSEIWSPLENQGWKPVESRNKPTLPEKSEGYIQVFLDGGLNQQRMGICDAVAVAKILNATLVIPYLELNPVWRDSSSFMDIFDVDHFIDVLKDDISIVKELPEEYSWSTREYYAIAVRDTRIKNSPVHASANWYLENVLPVLQSFGIAAISPFSHRLSFDNLPMDIQHLRCKVNFQALEFVPHIRTLGDALINRLRSPQGSAGEIGSNYLQEVTDGGDSKNAGKFVVLHLRFDKDMAAHSACDFGGGKAEKFALAKYRQVIWQGRLLNSQFTDEELRSQGRCPMTPEEVGLLLAALGFDNSTRLYLASHKVYGGEARISTLRQLFPLMEDKKSLASSYERFQIKGKASLLAALDYYVGLHSDIFISASPGNMHNAVVGHRTYLNLKTIRPNLVLMGQLFLNKTMEWSEFEHAVVEGHQNRQGQLRLRKPKQSIYTYPAPDCMCQA* 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0910 502 PANTHER O-FUCOSYLTRANSFERASE 2-RELATED 14 501 - -
Lja2g0910 502 PIRSF UCP009360 5 502 IPR024709 -
Lja2g0910 502 Pfam GDP-fucose protein O-fucosyltransferase 88 440 IPR019378 -
Lja2g0910 502 PANTHER O-FUCOSYLTRANSFERASE 39 14 501 - -
Lja2g0910 502 CDD O-FucT_plant 88 445 IPR024709 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0910 Lja-Chr2 8506488 8511860 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g0910 58 501 Miscellaneous Gene Families AT1G22460 33.978 7.39e-87 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0910 - - lja:Lj2g3v1454940.1 914.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0910 2 8506488 8511860 Lja2g0910 2 8506488 8511860 ECH