Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0855 ATGAATATCTGGTTGCAAGCACAGAGTACACTTGCTGGTTCTGGATCAGCTTCAGTGGCAGTGAAATATAGGTGGGTCCTTTTCAAAAGCAAAATGGGAGATGTAGCTAAGGACCTTATAGCTGGGACTGTTGAAGGGGCAGCACAATTGATAGTTGGACACCCATTTGACACAATCAAGGTCAAGCTCCAAAGCCAGCCAACACCAATCCCTGGCCAGCTTCCAAGGTATTCTGGTGCAATTGATGCTGTCAAGCAGACACTAGCAGCTGAAGGCCCAAGGGGCTTATACAAAGGTAGGGGTGCTCCACTTGCTACAGTAGCCGCCTTCAACGCTGCCCTATTTACGGTTAGGGGGCAAATGGAGGCATTGTTCAGGTCCCATCCCGGCGCTGGAGCTGGACTTGCTGTTTCCTTTCTAGTTTGCCCCACTGAACTGATCAAGTGCAGGTTTCACTGA 459 0.4989 MNIWLQAQSTLAGSGSASVAVKYRWVLFKSKMGDVAKDLIAGTVEGAAQLIVGHPFDTIKVKLQSQPTPIPGQLPRYSGAIDAVKQTLAAEGPRGLYKGRGAPLATVAAFNAALFTVRGQMEALFRSHPGAGAGLAVSFLVCPTELIKCRFH* 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0855 152 ProSiteProfiles Solute carrier (Solcar) repeat profile. 33 124 IPR018108 -
Lja2g0855 152 Pfam Mitochondrial carrier protein 35 126 IPR018108 -
Lja2g0855 152 Gene3D Mitochondrial carrier domain 5 152 IPR023395 -
Lja2g0855 152 PANTHER CARNITINE/ACYLCARNITINE CARRIER-LIKE PROTEIN 32 151 - -
Lja2g0855 152 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 32 151 - -
Lja2g0855 152 SUPERFAMILY Mitochondrial carrier 32 151 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0855 Lja-Chr2 7986989 7988871 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g0855 29 151 Miscellaneous Gene Families AT3G54110 32.857 7.34e-12 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0855 K15109 - gmx:100787332 211.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0855 2 7986989 7988871 Lja2g0855 2 7986989 7988871 ECH