Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0834 ATGGCACCTTCATTCGACATAAGCACTCATACAGTATGTGTAATGGATGCTTCAGGCCAACTAGGCTTTCGCCTCGTCCAGAAACTCCTCCAAAGAGGCTACACCGTTCATGCCTCCATTCAAAAATATGGGGTTGATAAAGAGATGTTCAATGAAATTTCAGCTGATTCTGATAAACTCAAGGTTTTCCGATCAGATCCTTTTGATTACCACAGCTTAATTGATGCTCTCAAAGGCTGCTCTGGCTTGTTCTACACATTTGAACCTCCCTTTGACCAGCCAGATTACGATGAATTCATGGCGGACGTGGAGGTAAGAGCTGCACACAACGTGCTCGAAGCTTGTGCGCAGACGGAAACAATGGATAAAGTAGTTTTCACATCCGCAGCAACCGCAACCGTTTGGAGGGAGGATCGTAAAACCATGGAACTAGATTTAGATGAGAGGCATTGGAGTGATGTCAATTTCTGTCGTAAATTCAAGTTATGGCATGGCATGTCAAAGACACTGGCAGAGAAGACAGCGTGGGCCTTAGCAATGGACAGAGGAGTGAATATGGTTTCCATAAACTCAGGTTTGGTAATGTCTCATGATCTCTCCATCAAGAACCCTTATTTGAGAGGCGCAGCTGAGATGTACGAGGATGGTGTGTTTGTGACCGTTGATTTGGAATTCTTGGTGGATGCCCACATCTGTGTCTACGAGGATGTCTCATCCTACGGTCGTTATTTGTGCTTCAACCACATCATCAACACCCAAGACGACGCCGTTCAGCTCGCTCGCAAGTTAACGCCAGCTGCTTCTTCCTCCATGCCTCAAAGTGATGACCATGGTAAGAGTTTCATAGAGCAGAGAATAAGCAACAAAAAGTTGAATAAATTGATGGTTGACTTTGAGGCTTGA 903 0.4518 MAPSFDISTHTVCVMDASGQLGFRLVQKLLQRGYTVHASIQKYGVDKEMFNEISADSDKLKVFRSDPFDYHSLIDALKGCSGLFYTFEPPFDQPDYDEFMADVEVRAAHNVLEACAQTETMDKVVFTSAATATVWREDRKTMELDLDERHWSDVNFCRKFKLWHGMSKTLAEKTAWALAMDRGVNMVSINSGLVMSHDLSIKNPYLRGAAEMYEDGVFVTVDLEFLVDAHICVYEDVSSYGRYLCFNHIINTQDDAVQLARKLTPAASSSMPQSDDHGKSFIEQRISNKKLNKLMVDFEA* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0834 300 CDD FR_SDR_e 12 296 - -
Lja2g0834 300 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 5 266 IPR036291 -
Lja2g0834 300 Pfam NAD(P)H-binding 17 135 IPR016040 -
Lja2g0834 300 Gene3D - 4 300 - -
Lja2g0834 300 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 9 299 - -
Lja2g0834 300 PANTHER - 9 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0834 Lja-Chr2 7773437 7776463 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g0834 12 298 Miscellaneous Gene Families AT5G19440 30.795 9.14e-40 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0834 - - gmx:100793329 554.673
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0834 2 7773437 7776463 Lja2g0834 2 7773437 7776463 ECH