Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0833 ATGGGAACTTCTCTCATCCGAACCGGTTCGTTCCCGGTCCAGAAACCTCTCCTTCCGGGTTCAACCCGGTTCTCTCTCTCGCGCCAAGCCTCTCTCGCCGGCGATAAGAACCACCCTCTATCGCCGAGGCTTTCACTGCATTTCTGCTCCAACGGCCGCCGCGACACGCCAGCGAGCGGGATCCAAAGAGCGTTCTCCGAAGGCTCGTTGATTCGTTCCGGTAGTGACAATTTCGGCCTTCGCCGGAATCTGAATCGGTCTCTCCCGGCGATCATACTAGACGAAGAAGAATTCCTCACCGACGAGGACAGCACCGCTTACCGCCGGCCGGAGAGCAGAATTCCGGTGGTGGATCTCGGATCAGGTTGTGGATCCGGCTACGGAGGCGATTACAGAAACGATGCCGTCACCGGCGGGAACGGCGGTGAAAGGATTAAAATAGGCGCGTATTATGAGGAAATGTTGAAGTCAAACCCTACCGACGCGCTTTTGCTGAGAAACTACGGCAAATTTCTTCACGAGGTGGAGAATGATATGGTGAAAGCAGAGGAATATTACGGAAGAGCGATTCTAGCGAATCCTAGCGATGGCGAACTTCTTTCGTTGTATGGGAAATTGATCTGGGAAATGGAGAGAGATCAAGAGAGAGCCCAATGTTACTTTGATCAGGCAATTCATGTTGCTCCTGATGATTGCACGGTGCTGGGATCCAATGCACACTTCATGTGGGAATCGGAGGAGGAGGTGGTTAACGGCGGAGGAATGAAGGGGAAAGCGGAGGAATCGGCGGCAGAGCTGATCGCTGCTTGTTAA 813 0.5363 MGTSLIRTGSFPVQKPLLPGSTRFSLSRQASLAGDKNHPLSPRLSLHFCSNGRRDTPASGIQRAFSEGSLIRSGSDNFGLRRNLNRSLPAIILDEEEFLTDEDSTAYRRPESRIPVVDLGSGCGSGYGGDYRNDAVTGGNGGERIKIGAYYEEMLKSNPTDALLLRNYGKFLHEVENDMVKAEEYYGRAILANPSDGELLSLYGKLIWEMERDQERAQCYFDQAIHVAPDDCTVLGSNAHFMWESEEEVVNGGGMKGKAEESAAELIAAC* 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0833 270 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 1 247 - -
Lja2g0833 270 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 1 247 - -
Lja2g0833 270 Gene3D Tetratricopeptide repeat domain 142 246 IPR011990 GO:0005515
Lja2g0833 270 SUPERFAMILY TPR-like 149 242 IPR011990 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0833 - - lja:Lj2g3v1485040.1 372.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0833 2 7759160 7760528 Lja2g0833 2 7759160 7760528 ECH