Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0830 ATGGCGGATGACGAGAGGAGCTTCCGCATCGGGTACGCTCTGGCACCGAAGAAGCGGAACAGCTTCATCCGAGACTCGCTCGTCACCCTCGCGAAATCGAGAGGTATTGACATGGTTCGGGTCGACCCGGACCGGAATCTGGCGGATCAGGGCCCGTTTGATTGCGTCCTCCACAAGCTCCACGGCGACGATTGGAAGCGCCAGCTGAAGGAGTTCGCGGTTAGGTTCCCGAATGCGGTGGTCTTAGACCCGCCGGAAGCGATTGAGAGGCTCCACAACCGGATTTCCATGCTGCAGGTTGTGTCCGAGCTTGAAATCGACGACCGGAGCGAGACGTTTGGGATTCCCGAGCAGATTGTTGTGTACGATAAGGAAACGCTCGCCGACCAGCGGAACTTGGAGGCGCTGAAGTTTCCGGTGATTGCGAAGCCGTTGGTGGCTGACGGCAGCGCCAAGTCGCATAAAATGGCGCTGGTTTTTAACGCCGGCGGGTTGGGCAAGCTGAAGCCGCCGATTGTGCTGCAGGAGTTTGTGAACCATGGTGGTGTTATCTTCAAGGTGTATGTGGTTGGGGAGCATGTGAGGTGCGTGAAGAGGAAGTCCTTGCCGGATGTTGAGGAGGACGAGCTGGTGGGGGTTACAGAGGACTTGTTGTCGTTTTCGCAGGTGTCGAATTTGGCCACCGATGAGAGGATTGATGATAGGTATTATAAGATGATGCATTTGGATAAGTCGGAGATGCCTCCTCTGGGGTTTATCACCCACATTGCTTGTGGATTGAGGCGTGTGATGAAGCTGAACCTGTTTAACTTCGACGTGATTCGGGATTCTAGATGTGGGAATCGGTACCTTATCATTGATATCAATTACTTCCCCGGGTATGCGAAAATGCCCGGTTATGAGACTGTTTTGACAGACTTTTTCTGTGATGTGTTGTGCAAGAAACAGCAAGGACTCGGCCTAAAGGACAGTTCGGATAATCCTGGTTCCGGTAGCTGTTCGCGCGGTTACGATATAAGAAGGATTCAAACCAACACTTGTTGCGGTGATGGGGATGAGGGTAGCCTTCAAGTTTCGCCTCTTGGCGCGGAAGAGAGAGAGAGTTCTGTGCAAGTATGA 1119 0.5317 MADDERSFRIGYALAPKKRNSFIRDSLVTLAKSRGIDMVRVDPDRNLADQGPFDCVLHKLHGDDWKRQLKEFAVRFPNAVVLDPPEAIERLHNRISMLQVVSELEIDDRSETFGIPEQIVVYDKETLADQRNLEALKFPVIAKPLVADGSAKSHKMALVFNAGGLGKLKPPIVLQEFVNHGGVIFKVYVVGEHVRCVKRKSLPDVEEDELVGVTEDLLSFSQVSNLATDERIDDRYYKMMHLDKSEMPPLGFITHIACGLRRVMKLNLFNFDVIRDSRCGNRYLIIDINYFPGYAKMPGYETVLTDFFCDVLCKKQQGLGLKDSSDNPGSGSCSRGYDIRRIQTNTCCGDGDEGSLQVSPLGAEERESSVQV* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0830 372 PANTHER INOSITOL-TETRAKISPHOSPHATE 1-KINASE 4 320 IPR008656 GO:0000287|GO:0005524|GO:0032957|GO:0047325|GO:0052725|GO:0052726
Lja2g0830 372 SUPERFAMILY Glutathione synthetase ATP-binding domain-like 83 298 - -
Lja2g0830 372 MobiDBLite consensus disorder prediction 348 372 - -
Lja2g0830 372 PIRSF ITPK 1 323 IPR008656 GO:0000287|GO:0005524|GO:0032957|GO:0047325|GO:0052725|GO:0052726
Lja2g0830 372 PANTHER INOSITOL-TETRAKISPHOSPHATE 1-KINASE 4 320 - -
Lja2g0830 372 Gene3D - 84 293 - -
Lja2g0830 372 Pfam Inositol 1,3,4-trisphosphate 5/6-kinase ATP-grasp domain 109 309 IPR040464 -
Lja2g0830 372 Pfam Inositol 1,3,4-trisphosphate 5/6-kinase pre-ATP-grasp domain 9 88 IPR041429 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0830 Lja-Chr2 7741857 7743504 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0830 K00913 - gmx:100794373 556.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0830 2 7741857 7743504 Lja2g0830 2 7741857 7743504 ECH