Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0816 ATGGAAGCAAGAGTTGAATTGAAGCAGAAGCAAGCTACTGGTTGTGTTGCACATCTAAGGCGAGCTTCACGTCCAACACTGTATCAACAACCATCACTTGCATCACCCACAAGCAAGGCTGTCGAAAAAATGAGGTTGGAAGATTATGAAAGCAAAAGGACAATTGTTGGTTCTCTTAGTGGACAATCCTTTCTTAAGTGTTATTTGAACTATAAGAATAGTGGAAGACCTAAACGTGTGATGTTCTACAATAATTACGAATGGTTGGATTATCCTAGAGATGTTGTTAACTTGGTTAAGAATGATTTTGAAATAAAAAATGCAGCGGTGGAAATAGAGTTAAATGGACGTGAACTTGTACTAGATTTTTTACAAATGTGTCAGGTGGACTTGCAAACTGGTTTGCAACAACCAATAGCATGGATTGATGAGGCAGGGAGCTGCTTTTTCCCTGAAGCTTGTGTTGCTTTTGATGGTAAATCTTATAACTTATGCGAACGTGAGGGTATGAACTTATGTATAAAAATTGAAGTGAATGGGGATGATGAATCTGAGTTGAGGGAGTGTAGTGAGGATCCCAACGTGTTAGTTAAGGATACTCAAGTGGAAATTGGAATAAGGATGATAGGATTGAGTTGTCAAAATGTTGGTGAATCCATTCTGCATAATAAAGTAGGTTCAGTTCCTTATGCTGAATATGTACAAGGAAAATTGGATTTGGATTGTGTACATAAGATATTCCTTAATGGAATGAGTAGTTTTGGCAATATTGATTTCGAGATAGTGGAGGCATACCGTTGTTCAGGTGCATCAATGCAACAACGGATGGAGCTATTCTCGACTCAAGTAAAAATCACAAAAGAATTACATGGGGATGCAAATGTTCGATATGCTTGGCTTCCCTTTTCTAAAGGAGAATTATCTACAATGATGAAATGTGGACTTGGGCATTGTAGACTACGTGCAACCAAATGCTCATACGGTGTTGGTATTCATCTTTCATCTGTTACTTGCCCTTATGTCAGTGCTCGTTATTGTGATATTGACGAAAATGGTGTTCGTCATTTGATTTTTTGTCACCTAATAATGGGGAACATGGAAGTTCTTCGTCCGGACATTGGCACCGCTACTAGTCAGTTTCAACCCAGCAACCCTGAATATGATACTGGAGTGGATGACATCAAATGCCCAAGATACTATGTTGTACGGAATATGAATATAAACACTCATATTTATCCAGAATTTGTTATTAGTTTTAAGGTCTCTGGGGATGCTGAAGATCTCTTATATTTAACAATTGATGGCTTCACTATCACCAAAAAAGTTCCAACATCTCCTTGGCTACCCTTTTCCATACTTGTTTCTGCTATCATTGACAAGGCTCCTCCTAGTGATATGAGTCTTATCAAGGCACATTACGAACTATACAAGGCAAAGCATATTTCTCGTGATGATTTTGTGAAGGAGTTGAGGTTGATAGTCTGA 1485 0.3832 MEARVELKQKQATGCVAHLRRASRPTLYQQPSLASPTSKAVEKMRLEDYESKRTIVGSLSGQSFLKCYLNYKNSGRPKRVMFYNNYEWLDYPRDVVNLVKNDFEIKNAAVEIELNGRELVLDFLQMCQVDLQTGLQQPIAWIDEAGSCFFPEACVAFDGKSYNLCEREGMNLCIKIEVNGDDESELRECSEDPNVLVKDTQVEIGIRMIGLSCQNVGESILHNKVGSVPYAEYVQGKLDLDCVHKIFLNGMSSFGNIDFEIVEAYRCSGASMQQRMELFSTQVKITKELHGDANVRYAWLPFSKGELSTMMKCGLGHCRLRATKCSYGVGIHLSSVTCPYVSARYCDIDENGVRHLIFCHLIMGNMEVLRPDIGTATSQFQPSNPEYDTGVDDIKCPRYYVVRNMNINTHIYPEFVISFKVSGDAEDLLYLTIDGFTITKKVPTSPWLPFSILVSAIIDKAPPSDMSLIKAHYELYKAKHISRDDFVKELRLIV* 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0816 494 Gene3D - 235 423 - -
Lja2g0816 494 PANTHER INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO1-RELATED 4 494 - -
Lja2g0816 494 ProSiteProfiles PARP catalytic domain profile. 219 440 IPR012317 GO:0003950
Lja2g0816 494 ProSiteProfiles RST domain profile. 441 494 IPR022003 -
Lja2g0816 494 ProSiteProfiles WWE domain profile. 66 141 IPR004170 -
Lja2g0816 494 PANTHER INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4-RELATED 4 494 IPR044964 -
Lja2g0816 494 SUPERFAMILY ADP-ribosylation 242 420 - -
Lja2g0816 494 Pfam RCD1-SRO-TAF4 (RST) plant domain 443 494 IPR022003 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0816 Lja-Chr2 7614464 7617143 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0816 - - lja:Lj0g3v0313169.2 615.535
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0816 2 7614464 7617143 Lja2g0816 2 7614464 7617143 ECH