Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0815 ATGGAAGCTAGAGTTGAACTGAAGCAGAAGAAAGCTACTAGTTGTGTTGCACGTATAAAGCAATCTTTGCGACCAACAATATATCAACAATCATCATTTACATCACCCACAAGCAAGGTTGTCAAAAAAATGAGACTAGAGAATTATGAAAGCAAAAGAGTAATTGTTGGTCCTCATAGTGGACACTCCTTTCTGAGGTATTATTTGAACTATAAGAAGAGTGGAAGACCTAAACGTGTGATGTTCTATAATAATTGTGAATGGTTGGATTATCCTAGAGATGTTGTTAACCTGGTTAAGAATGATTTTGAAATAAAAAATGCAGTCGTGGAAATAAGGTTAAATGGACATGAACTTGTACTAGATTTTTTGCACATGTGTCAGGTGGACTTAAAAACTGGTTTGCAGCAACCAATAGCATGGACTGATGAGGCAGGGGACTGCTTTTTCCCTGAAGTCTGTGTTGCTTTTGATGGTAAATCTTATAACTTATGTGAACATGAGGGTATGAACTTGTGTATTAAAATTGAAGTGAACGAGGATGATGAATCCGAGCTGAGGGAGAATAGTGGGGAGCCCAATGTGTTAGTTAAGGATACTCAAGTGGAAATTGGAACTAGGATGAAAGGATTGGGTTGTGGAAATGTCGGTGAATCCATTCTGCATAATAAAGTAGGTCTAGTTCCTTACGCTAAATATGTACAAGGAAAATTGGATTTGAATTATGTACAGAAGATGTTCCTTAATGGAATGAGTAGTTTTGGCAATATTGATTTTGAGATAGTGGAAGCATATCATTGTTCACCTGCATCAATGCAACAACGGTTAGAGCTATTCTTGACCCAAGCAAAAATCACAAAAGAATTACATGGGGATGCAAATGTTCGATATGCTTGGTTTCCTTTTTCTAAAGGAGAATTATCTACAATGATGAAGTATGGACTTGGGCGTTGTGCATTATGTGCAACCAAATGCTCATACGGTGCTGGTGTTCATCTTTCAGATGTTACTTGCCCTTATGCCAGTGCTCGTTATTGTGATATTGACGAAAATGGTGTTCGACACTTGGTTTTTTGTCGCTTAATAATGGGGAACATGGAAGTTCTTCATCCTAGCATTGACACCGCCACTAGTCAGTTTCAACCCAGCAACTCTGAATATGATACTGGAGTGGATGACATACAATGCCCAAGATACTATATTGTATGGAATATGAATATAAACACTCACATTTATCCAGAATTTATTATTAGTTTCAAGGTCTCTGTGGATGTTGAAGGTCATTTTTGTGGAACTCTCGGAGAGAGTAATGACTCAGGTGCTAATTCCTTTGGGCCCAATTCGTCTAGTCAAGCTACTAATGGGGTTGCAAGCACCCAAAAAGTTCCAAAATCTCCTTGGCTACCTTTTTCTATGCTTGTTTCTGCTATCGGTGACAAGGCTCCTCCTAGTAATATGAGTCTTATCAAGTCACATTATGAACTATACAAGGCAAAGCATATTTCTCGTGGTGATTTTGTGAAGGAATTGAGGTTGATAGTTGGAGATAATTTATTGAGAGCTACAATAATAAGTCTTCAATTCCGGGTTCCTCTACACAAGGAGGAGGAAATGCCACTTGTAATAAGGATATTGACCTTCATAATAACATAG 1653 0.3799 MEARVELKQKKATSCVARIKQSLRPTIYQQSSFTSPTSKVVKKMRLENYESKRVIVGPHSGHSFLRYYLNYKKSGRPKRVMFYNNCEWLDYPRDVVNLVKNDFEIKNAVVEIRLNGHELVLDFLHMCQVDLKTGLQQPIAWTDEAGDCFFPEVCVAFDGKSYNLCEHEGMNLCIKIEVNEDDESELRENSGEPNVLVKDTQVEIGTRMKGLGCGNVGESILHNKVGLVPYAKYVQGKLDLNYVQKMFLNGMSSFGNIDFEIVEAYHCSPASMQQRLELFLTQAKITKELHGDANVRYAWFPFSKGELSTMMKYGLGRCALCATKCSYGAGVHLSDVTCPYASARYCDIDENGVRHLVFCRLIMGNMEVLHPSIDTATSQFQPSNSEYDTGVDDIQCPRYYIVWNMNINTHIYPEFIISFKVSVDVEGHFCGTLGESNDSGANSFGPNSSSQATNGVASTQKVPKSPWLPFSMLVSAIGDKAPPSNMSLIKSHYELYKAKHISRGDFVKELRLIVGDNLLRATIISLQFRVPLHKEEEMPLVIRILTFIIT* 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0815 550 PANTHER INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4-RELATED 4 530 IPR044964 -
Lja2g0815 550 PANTHER INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO1-RELATED 4 530 - -
Lja2g0815 550 Pfam RCD1-SRO-TAF4 (RST) plant domain 463 527 IPR022003 -
Lja2g0815 550 ProSiteProfiles RST domain profile. 461 532 IPR022003 -
Lja2g0815 550 ProSiteProfiles WWE domain profile. 66 141 IPR004170 -
Lja2g0815 550 ProSiteProfiles PARP catalytic domain profile. 219 440 IPR012317 GO:0003950
Lja2g0815 550 SUPERFAMILY ADP-ribosylation 240 420 - -
Lja2g0815 550 Gene3D - 235 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0815 Lja-Chr2 7565878 7570554 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0815 - - lja:Lj0g3v0359639.1 765.377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0815 2 7565878 7570554 Lja2g0815 2 7565878 7570554 ECH