Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0803 ATGATGTCCTCTACCTCATATTTGAACCACAAAAGCAATGAACTTGATCAGCAAAGTGAGAGTGGTAGTGGTAGTGGTGGTGGTGGTAGTAATAGTAGTGGCGACTTTGCTCTCTACAGGGTGGACATTCCTCAAACCCCTTATGACTCGCCAATCCAGATTACTATGGAGAGGTCTGCTTCTCGGAGACTGGAGGACCAGTGCGTGTCGAATTCCTTGTTTACGGGCGGGTCTAATCAGGCTACTCGTGTTCTATTGAAGGAGAAAGTGATTGAATCAGAATCTAGCCATCCCCAGATGACTGGTGCAAAAGGGTCATCTTGTGATGTGCCTGGCTGTGGTGGGAAGGTCATGAGTGATGAGAGAGGATTGGATATTCTCCCTTGTGAGTGTGGTTACAAGATTTGTGGAGATTGTTACAGAAATGCTTTGAGGGAATGTGAGGGGGTTTGTCCTGGATGCTGCGGGCCTTACAAGGACCCGAAGATGATGAAAGAGGATGTACCGTTGCCTCCTGGTGTGTCAAAGATGGAGAGGAAGTTGTCGAAGATGAAATCGGGGAATTTTGCTAATGAATTTGATCAGGCTCAGTGGTTGTATGGAAACAAGGGGAGCTATGGATATGGGAATGCTATGTGGCCAAAAGAGTCTGAAAGTGATGCCAGTTCTGCTTCTGCTTCTGCTTCTGATTGGATGAGTGGTGACCCTAAAGTATTTCATGAGAAGCAGTGGAGACCTTTGACCCGGAAATTGAGTATTTCTGCTGCAATTTTGAGTCCATATAGGCTCATAATACTAGTTCGGCTTGTGGTTCTTGTTTTCTTCCTGAGGTGGAGGGTCCTAAACCCCAATGATGATGCAATCTGGCTGTGGTTTATGTCAGTCGTTTGTGAAATCTGGTTTGCCTTCTCCTGGCTGCTTGACCAGCTGCCTAAGCTCTTCCCCATAAACCGTGACGCTGATCTCGATGTCTTGAAAGAGAAGTTTGAAACTCCTAATCCTGCTAATCCTGAAGGCAAGTCTGATCTCCCTGGAATAGACATGTTTGTGTCAACTGCAGATCCAGAAAAAGAACCACCGCTCGTTACTGCAAACACCATTCTTTCTATTCTAGCTGCTGACTACCCTGTTGAGAAGCTTTCATGTTATGTCTCTGACGATGGAGGCGCGCTTCTAACTTTTGAGGCCATGGCAGAGGCAGCAAGTTTTGCCAATTTGTGGGTTCCTTTTTGTAGGAAGCATGACATTGAACCGAGGAACCCAGAATCTTATTTTAATATGAAGAGGGATCCTTACAAGAACAAGGTTCGCTCTGACTTTGTGAGGGACCGCAGGCGGGTAAAGCGGGAGTATGATGAGTTTAAGGTAAGAATCAATGGCCTTCCTGATTCGATCCGGCGGCGTTCGGAAGCTTATAATGCTAGAGAGGAGATGAAAGCTATGAAGATGCAGAGAGAGAATCAAAGTGATGAACCATTGGAGATTGTGGAAGTTATTAAAGCTACATGGATGGTTGATGGCACACACTGGCCTGGCACTTGGACTACTCCTGCATCACAGCATGCCAGAGGTGATCATTCCAGTATCATACAGGTAATGTTAAAACCTCCAAGTGATGAGCCACTGACTGGAACAACATCAGATTCAAATGCCATGGATTTCAGTGAAGTTGATATTCGTCTTCCTCTGCTTGTCTATGTTTCTCGCGAGAAACGACCCGGCTATGATCACAACAAGAAGGCCGGGGCCATGAATGCCCTGGTTCGGTCCTCAGCCATCATGTCCAATGGCCCTTTCATACTCAACCTGGACTGTGACCATTACATATACAACTCAAAAGCCTTAAGGGAAGGTATTTGCTTCATGATGGACCGCGGAGGGGAAAGGCTCAGCTACGTTCAATTTCCTCAAAGGTTCGAAGGAATTGACCCTTCTGATCGCTATGCCAATCACAACACTGTCTTCTTTGATGTCAACATGCGTGCACTAGATGGGATTCAGGGTCCAGTATATGTTGGCACAGGTTGCTTGTTTCGAAGAACTGCTCTTTATGGCTTTGATCCACCCCGGGTGAAAGAAGAATCTGGTGGTTGGTTTGGTAGTAAGAACAAGAAATCCTCAACAGTTGCCTCTGTCCCTGAAGCTAGTTCTGCTGATGATGAAGAAATGATGAACATTGCTCTTATTCCTAAAAGTTTCGGCAACTCAAGCCTTCTTGTTGATTCAGTCAAGGTGGCTGAGTTTGGAGGTAGGCCTCTTGCTGATCATCCATCTATAAAAAACGGACGTCCCCCTGGCGCTCTAACTCTTCGCCGGGATCTTCTTGATACTCCAACTGTTGCCGAGGCCATCGATGTGATCTCATGTTGGTATGAAGATAAAACAGAATGGGGCCTCAGAATTGGGTGGATTTACGGGTCCGTGACCGAAGATGTTGTTACAGGTTACAGAATGCACAATAGAGGATGGAGATCAGTGTATTGCGTGACCAAAAGAGATGCATTCAGAGGCACTGCTCCTATAAACTTAACAGATAGGCTCCATCAAGTTCTTCGTTGGGCAACAGGCTCGGTCGAGATCTTCTTCTCCCGGAACAATGCTCTCTTAGCTGGCTCTAGATTGAAATTCCTGCAAAGAATTGCTTACCTCAACGTTGGAATCTACCCTTTCACTTCACTCTTCCTCGTTGTTTACTGCTTCATCCCTGCACTTTCCCTTTTCTCTGATCAGTTCATTGTTGGTACCCTTGAAGTCACATTCCTAGCCTACCTTTTAGGAATCACACTGACCCTTGTGGCTCTTGCTGCTCTTGAGATCAAGTGGTCCGGTATCCATATTGACGAGTGGTGGAGGAATGAGCAGTTCTGGTTAATTGGAGGCACAAGCGCTCATCTAGTAGCTGTGTTTCAGGGAGTGCTAAAGGTGCTGTTTGGCATTGAGATTTCATTCACTCTGACATCGAAATCCTCGGCTGATGACGAGAACGACGAGTTTGCCGATATTTATGTGATCAAATGGAGCTCTCTGATGATACCACCAGTCACTATCATCATGGTTAATCTGATTGCGATCGCGGTCTCGGTTGTCAGGACTATATACAGCGACGATCGTCACTGGAGCAGAATGATTGGAGGTGTGTTCTTCAGCTTTTGGGTGCTGGTTCATCTTTATCCATTTGCAAAGGGGCTTATGGGAAGAAGAGGTAAGACACCAACGATTGTGTTTGTTTGGTCTGGTCTTATATCCATCACTATATCACTGCTCTGGGTTGCTATTAACCCTCCTTCTGGCAACAATCAAATTGGAGGGTCCTTTCAATTCCCTTGA 3327 0.4605 MMSSTSYLNHKSNELDQQSESGSGSGGGGSNSSGDFALYRVDIPQTPYDSPIQITMERSASRRLEDQCVSNSLFTGGSNQATRVLLKEKVIESESSHPQMTGAKGSSCDVPGCGGKVMSDERGLDILPCECGYKICGDCYRNALRECEGVCPGCCGPYKDPKMMKEDVPLPPGVSKMERKLSKMKSGNFANEFDQAQWLYGNKGSYGYGNAMWPKESESDASSASASASDWMSGDPKVFHEKQWRPLTRKLSISAAILSPYRLIILVRLVVLVFFLRWRVLNPNDDAIWLWFMSVVCEIWFAFSWLLDQLPKLFPINRDADLDVLKEKFETPNPANPEGKSDLPGIDMFVSTADPEKEPPLVTANTILSILAADYPVEKLSCYVSDDGGALLTFEAMAEAASFANLWVPFCRKHDIEPRNPESYFNMKRDPYKNKVRSDFVRDRRRVKREYDEFKVRINGLPDSIRRRSEAYNAREEMKAMKMQRENQSDEPLEIVEVIKATWMVDGTHWPGTWTTPASQHARGDHSSIIQVMLKPPSDEPLTGTTSDSNAMDFSEVDIRLPLLVYVSREKRPGYDHNKKAGAMNALVRSSAIMSNGPFILNLDCDHYIYNSKALREGICFMMDRGGERLSYVQFPQRFEGIDPSDRYANHNTVFFDVNMRALDGIQGPVYVGTGCLFRRTALYGFDPPRVKEESGGWFGSKNKKSSTVASVPEASSADDEEMMNIALIPKSFGNSSLLVDSVKVAEFGGRPLADHPSIKNGRPPGALTLRRDLLDTPTVAEAIDVISCWYEDKTEWGLRIGWIYGSVTEDVVTGYRMHNRGWRSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALLAGSRLKFLQRIAYLNVGIYPFTSLFLVVYCFIPALSLFSDQFIVGTLEVTFLAYLLGITLTLVALAALEIKWSGIHIDEWWRNEQFWLIGGTSAHLVAVFQGVLKVLFGIEISFTLTSKSSADDENDEFADIYVIKWSSLMIPPVTIIMVNLIAIAVSVVRTIYSDDRHWSRMIGGVFFSFWVLVHLYPFAKGLMGRRGKTPTIVFVWSGLISITISLLWVAINPPSGNNQIGGSFQFP* 1109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0803 1108 SUPERFAMILY RING/U-box 93 163 - -
Lja2g0803 1108 MobiDBLite consensus disorder prediction 1 36 - -
Lja2g0803 1108 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 91 170 IPR013083 -
Lja2g0803 1108 PANTHER CELLULOSE SYNTHASE-LIKE PROTEIN 55 1106 - -
Lja2g0803 1108 MobiDBLite consensus disorder prediction 1 32 - -
Lja2g0803 1108 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 547 702 IPR029044 -
Lja2g0803 1108 SUPERFAMILY Nucleotide-diphospho-sugar transferases 361 901 IPR029044 -
Lja2g0803 1108 Pfam Cellulose synthase 346 1099 IPR005150 GO:0016020|GO:0016760|GO:0030244
Lja2g0803 1108 Pfam RING/Ubox like zinc-binding domain 110 159 - -
Lja2g0803 1108 Coils Coil 471 491 - -
Lja2g0803 1108 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 55 1106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0803 Lja-Chr2 7376416 7380903 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g0803 4 1108 Glycosyltransferase AT3G03050 70.485 0.0 1635
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0803 K20924 - gmx:100813900 1771.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0803 2 7376416 7380903 Lja2g0803 2 7376416 7380903 ECH