Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0792 ATGCAGAAATTGGGAGACTTCAAACTACCGCATTTCTTCAATTACCCACCTTACTTCACTTTGCAGCCAGTAAGAGACACTAGAGAGAAGCAGATACAGCTTTGGAAAGAGCTTATTTTAGATTACTGCAAAACACAGAAGTTATTTGTAATTGGGCTTGAAGAAGAGTTTCCTCTGTTTACAAATCCTGTAATTGAAAGGTCTCTTACTCATGAAGCCAGAGAAGCGTTTGTTTCAGCCTTAGTTTCAGAAGGACGTGCAGAATGGATGGATAAAGGACATAGGAAATGTCTCGTTCTCTGGCATCGGATTCAAGATTGGGCTGAAATTTTATTACAGTTTGCGAAAGATAATGGACTCGAGGACAGTGTTGTGACAATAGAAGAAATACGCTTTGGGACTGAATCTCAAGGAACAGAGCTTCATGGGATCGACCGAACTATTCTGAATCGGGCATTGAAACTATTAGAACAGAAGGGGAAGCTTGTGGTCTTTAAAGGAACTTCAACTGATGATGAAGGAGTTAAATTTTCTGTATGA 540 0.3981 MQKLGDFKLPHFFNYPPYFTLQPVRDTREKQIQLWKELILDYCKTQKLFVIGLEEEFPLFTNPVIERSLTHEAREAFVSALVSEGRAEWMDKGHRKCLVLWHRIQDWAEILLQFAKDNGLEDSVVTIEEIRFGTESQGTELHGIDRTILNRALKLLEQKGKLVVFKGTSTDDEGVKFSV* 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0792 179 Gene3D - 100 178 IPR036388 -
Lja2g0792 179 SUPERFAMILY "Winged helix" DNA-binding domain 102 177 IPR036390 -
Lja2g0792 179 Pfam ESCRT-II complex subunit 13 145 IPR008570 GO:0000814|GO:0071985
Lja2g0792 179 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS25 1 179 IPR008570 GO:0000814|GO:0071985
Lja2g0792 179 Gene3D - 5 99 IPR014041 -
Lja2g0792 179 PANTHER - 1 179 - -
Lja2g0792 179 SUPERFAMILY "Winged helix" DNA-binding domain 7 107 IPR036390 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0792 K12189 - gmx:100803388 340.502
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0792 2 7251634 7254370 Lja2g0792 2 7251634 7254370 ECH