Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0784 ATGGCTGCTCTGCAATACTTGGATTCGCTTCGCAGCGCGCACCCGGAGCTTGACGATTGGTACAATTCTCTTGCGGATCTGTACCAGAAGAAGCTCTGGCATCAGCTCACTCTCAAGCTCGAGCAGTTTCTCGCTCATGCTGTTTTCCAGGCTGGCGATGCTTTGATTCAGCTGTACCACAATTTCATCACAGACTTTGAGACTAAAATCAACCTTCTCAAGCTTGCACATTTTGCTGTGATGGTTTCTCGGCAGTATTCTGAGAAAGAAGCTGCCGTTGGTTATCTTGATGGGATCATTGAGAAACTGCAAGCCACTAAAGAACAGCGCATAGAAGAACCTATTCTATACATTAAGATGCAAATAGCCATATTTAAGCTTGAGCAAGGTGATCAAAAGGAATGCAAGAAGCTTCTGGAAGATGGAAAGAGTACACTAGACAGCATGACAGATATCGATCCAACTGTGTATGCTAGCTATTACTGGGTATCTTCTCAGTTTCATAAATCCCGCCAGGAATTTGCTGAGTTCTACAAAAGTGCTCTTCTCTATTTGGCATACACAGCAGTGGAATCTCTCTCCGATTCATTCAAGCTGGATTTGGCTTTTGATTTGTCCCTTTCTGCTCTGCTGGGGGATAACATCTACAACTTTGGAGAGCTACTTGCCCATCCAATAATTAAGAGCCTTCTGGGGACAAAGGTGGAGTGGCTGTACTATATTTTGCAGGCATTCAATTCTGGTGATTTGGTTCGATATCAAGAACTATGTCGGGTTCATAATGCTGCTTTAAGGGCTCAACCAGCACTAGTTCAAAATGAACAGAGGTTATTGGAAAAGATCAACATTCTCTGCCTGATGGAGATTATATTCAGTCGGCCTTCGGAAGATCGAACTATTCCCCTGGCTGTAATTGCAGAGCGTACAAAACTTTCTATAGAGGATGTGGAGCATCTTCTTATGAAGAGCCTATCTGTTCATCTAATTGAGGGTATAATTGATCAAGTTGAAGGCACAGTGCATGTTTCCTGGGTGCAGCCAAGAGTTTTGGGCATTCAACAGATCAAATCCTTACGTGATCGACTGGACAGTTGGACAGGAAAAGTACACACCGCATTGTTGTCCATCGAGGCGGAAACACCTGATCTAATTGGATCATGA 1161 0.4376 MAALQYLDSLRSAHPELDDWYNSLADLYQKKLWHQLTLKLEQFLAHAVFQAGDALIQLYHNFITDFETKINLLKLAHFAVMVSRQYSEKEAAVGYLDGIIEKLQATKEQRIEEPILYIKMQIAIFKLEQGDQKECKKLLEDGKSTLDSMTDIDPTVYASYYWVSSQFHKSRQEFAEFYKSALLYLAYTAVESLSDSFKLDLAFDLSLSALLGDNIYNFGELLAHPIIKSLLGTKVEWLYYILQAFNSGDLVRYQELCRVHNAALRAQPALVQNEQRLLEKINILCLMEIIFSRPSEDRTIPLAVIAERTKLSIEDVEHLLMKSLSVHLIEGIIDQVEGTVHVSWVQPRVLGIQQIKSLRDRLDSWTGKVHTALLSIEAETPDLIGS* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0784 386 Gene3D - 220 343 - -
Lja2g0784 386 PANTHER PROTEASOME COMPONENT (PCI) DOMAIN PROTEIN-RELATED 1 385 - -
Lja2g0784 386 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 272 365 - -
Lja2g0784 386 SMART PINT_4 272 365 IPR000717 -
Lja2g0784 386 ProSiteProfiles PCI domain profile. 174 347 IPR000717 -
Lja2g0784 386 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 13 1 385 IPR035298 -
Lja2g0784 386 SUPERFAMILY "Winged helix" DNA-binding domain 274 348 IPR036390 -
Lja2g0784 386 Pfam PCI domain 238 343 IPR000717 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0784 K03039 - gmx:100804455 706.057
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0784 2 7140379 7144948 Lja2g0784 2 7140379 7144948 ECH