Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0781 ATGGCGGACAACGGAGGAGAGCGGACACCAAACTTGTTCGAAGACATCTTGTTCGATGACTGGGAAGACGCCATGCTCGACCAGTTATTCGCAGCCGAAGAGCTTGCCCTCTCTTCAATCCCCAAGCCACCATCAACAACCTCAAAAAACCCTTCCTCCTCCATCTCTCACCACCACCACCAACCGCCTCCTTCGCTCGCCGTTTCAACTCTCGACACCACCGCCTTCTCGCCCCCTCGAGAACTCTCTCAGAGACTCACCCATTTCGACGCTCCTCGTTATTCTCCGCCTCGCCCCCAGAAACCCGATTCCGATAAAGAACTCGAAATCGAACTGTTAAAGAAGGAGCTGGGGCGTGCGTCGAAGCAGATTGCAAATCTGGAACAGGAGTGTCTCAACTTAAAGAGAGAAAAAGACAAGAAAGAGGAGCAGCTCAAAATTGTATCTTCCAAGAACGAGGAAGCAAACGCTTGTGCTAAATGTTCAGGAAGTAGAGACAAGGATTTTGGAACTCTTGCTCCTGACCATCATAACACCTCTTCAAAAGTTCAAAATGGAGTATCATCAATTGATCCAATTGTTGAGACAACTGTTAAAGTTAACAGAGTTAATACAGAAATGGTTAGTCATCGAGAAGCTCAAGATTTTCGAAATAATGATGTGCCTTCTTATCTTGACCTATCCCAGCAGTTGCTGGCAGTGTGGGGATCTTCAACTGACAAAAAGCTAGGAAGTGGCGCAATATCCAAGTTGCTCATGCGTCTGCCTTCTGAAATAACACAAAAATTACTTACAGATATAAACTCTTCTGGAGTATCTTTGTATGATGTTAAGGATTGTACTCCAGAAGCGGAAAAGGTGTCCCGTCTGTACCTTGCACTGACAAAGATAGCTGATGGAAAAGATATTTTGGAAACTTTGATAGAACCTTTGCTTGATCTATGTGATGTGGAAAATGTTGTTGTTGTCCGTACCTCTCTATGTATAATGCATACTCTTCTAAAGCTCTTACTGGAATTGGAAACGAATTTTGGAAGAAGGGACAATGTCTTCATTGAAGGAATTTGCGACGAAAAGGACCTTATGGATTCTGGTGGATTGGAAGGTCTAAAAGATGGAAAGTTCTTCAATGAAGAAATACATAGAAAGGAGTGCTGGAGTCATCATAATGCCTTACAATCTGAAATAAATTGGCCGTACCTTTTTGAGACAATGCATCAAATTGCCATGAAGATCACAGAAGAAAGTGTGAGAGTGGAGGTAGCGTCCATTATGAAGCTACTTCTTCTGAGGAGTAATGCTTACTTTGAGAGGGATCAGTTCAGCCAGAAAATAGTTTTTAAAACTATTTCTGAATTTCTTAAGGAGGATGCTGGGCTGCGTGTGAGAAATCACGCTCTAAGACTTCTGTATCTTGTACTAAATTGTCCAAAACTCTTGGCTCGATTCTGCTGTGGTTGCAAAGAGGGGGATGATAGTGTTGCTACGGAGGAGAGTTCAACTTCTTCAGATTTCCAAAATTATAAAATCATCCTCCAACGATTGGCTGAATGTGTGGTATCCGCGGGTGGCGGTTTACGGGAGTTGAAAATAAGCAGAAATGCTATTCTTGTGCTGGCATTCCTCGCATCATCTGGAAAACCTGGTTTTGAAATACTCGTTGGTCATAAGCTAGCAGAGGAGGAAAACTATCTCATGTTGATTTTGCAATTACTGGTATCAGAGATGAACTTTGAAGCTGAGGCACACGATGAGCTACCAGAAATTTTTAGGGAGAGGTCATTTCTGATACGGGAGATATTGATATTACTCAACAGACTAGTGTCTAGTCCTTCATATTCTGCTACTGTCTTGCGCGGTCTAACCAACGGTAGGGATATGACTGGTTGGACAGTTGATGCTGCAACTAGATTATCTCGGAAAGGAAATGAAAATAAGCAGCAGGACAGCATGGTGAAGCATATCAGAACTGAAATCGTTGACCTTGCTCGATTGTTCAAGAAAAGGGTATTCACATATCTAGGAGATGAATGGTTATGA 2040 0.4284 MADNGGERTPNLFEDILFDDWEDAMLDQLFAAEELALSSIPKPPSTTSKNPSSSISHHHHQPPPSLAVSTLDTTAFSPPRELSQRLTHFDAPRYSPPRPQKPDSDKELEIELLKKELGRASKQIANLEQECLNLKREKDKKEEQLKIVSSKNEEANACAKCSGSRDKDFGTLAPDHHNTSSKVQNGVSSIDPIVETTVKVNRVNTEMVSHREAQDFRNNDVPSYLDLSQQLLAVWGSSTDKKLGSGAISKLLMRLPSEITQKLLTDINSSGVSLYDVKDCTPEAEKVSRLYLALTKIADGKDILETLIEPLLDLCDVENVVVVRTSLCIMHTLLKLLLELETNFGRRDNVFIEGICDEKDLMDSGGLEGLKDGKFFNEEIHRKECWSHHNALQSEINWPYLFETMHQIAMKITEESVRVEVASIMKLLLLRSNAYFERDQFSQKIVFKTISEFLKEDAGLRVRNHALRLLYLVLNCPKLLARFCCGCKEGDDSVATEESSTSSDFQNYKIILQRLAECVVSAGGGLRELKISRNAILVLAFLASSGKPGFEILVGHKLAEEENYLMLILQLLVSEMNFEAEAHDELPEIFRERSFLIREILILLNRLVSSPSYSATVLRGLTNGRDMTGWTVDAATRLSRKGNENKQQDSMVKHIRTEIVDLARLFKKRVFTYLGDEWL* 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0781 679 Coils Coil 110 151 - -
Lja2g0781 679 MobiDBLite consensus disorder prediction 84 106 - -
Lja2g0781 679 PANTHER ATR INTERACTING PROTEIN 18 676 IPR044952 GO:0006974
Lja2g0781 679 MobiDBLite consensus disorder prediction 39 71 - -
Lja2g0781 679 SUPERFAMILY ARM repeat 220 556 IPR016024 -
Lja2g0781 679 MobiDBLite consensus disorder prediction 156 185 - -
Lja2g0781 679 MobiDBLite consensus disorder prediction 40 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0781 Lja-Chr2 7123818 7131068 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0781 - - gmx:100817091 763.451
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0781 2 7123818 7131068 Lja2g0781 2 7123818 7131068 ECH