Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0776 ATGAATCGCCACCACGATCCCAATCCATTCGACGAAGACGAAGTCAATCCCTTCTCGAACGGTGCTGCTCCTGGATCTAAATCACGTATTCCACCATTGGCATCCGAACCACTGGGCTTTGGTCAAAGACATGATGCTACAGTTGATATTCCTTTGGATACCACAAATGAGCCTAAAAAAAAAGGTCAAGAGCTAGCAGCTTGGGAAGCAGATTTGAAAAGGAGAGAAAAGGATTTAAAAAGAAGAGAGGATGCTGTTTCTAGAGCTGGTGTGCCTGTTGATGATAAGAATTGGCCTCCGATTTTCCCAATTATTCACCATGATATTGCCAATGAGATACCGGTTCATGCTCAGAGGCTGCAATATTTGGCCTTTGCAAGTTGGTTAGGAATTGTTCTCTGCCTTGTTTTTAATGTAGTTGCTGTGATGGTCTGTTGGATCAGAGGCGGTGGTGTTAAAATTTTTTTCCTTGCGGTGATCTATGCTCTACTTGGTGTTCCCCTTTCATATGTGCTTTGGTACAGGCCCCTTTATCGTGCTATGAGGACGGATAGTGCACTGAAGTTTGGCTGGTTTTTCATGTTCTACTTGCTTCATATTGCATTTTGCATCTTTGCTGCAATTGCACCTCCAGTTGTTTTTCATGGGAAATCATTAACGGGCATCCTTGCAGCAACTGACGTCTTCTCAGACCATGTATTGGTTGGGATATTCTATTTGGTTGGATTTGGCCTGTTTTGCTTGGAGTCTCTTCTAAGCTTGTGGGTAATTCAGAAAATATACCTGTTTTTCCGGGGGCATAAGTGA 807 0.4325 MNRHHDPNPFDEDEVNPFSNGAAPGSKSRIPPLASEPLGFGQRHDATVDIPLDTTNEPKKKGQELAAWEADLKRREKDLKRREDAVSRAGVPVDDKNWPPIFPIIHHDIANEIPVHAQRLQYLAFASWLGIVLCLVFNVVAVMVCWIRGGGVKIFFLAVIYALLGVPLSYVLWYRPLYRAMRTDSALKFGWFFMFYLLHIAFCIFAAIAPPVVFHGKSLTGILAATDVFSDHVLVGIFYLVGFGLFCLESLLSLWVIQKIYLFFRGHK* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0776 268 Coils Coil 65 85 - -
Lja2g0776 268 Pfam SCAMP family 96 266 IPR007273 GO:0015031|GO:0016021
Lja2g0776 268 PANTHER SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN SCAMP 1 268 IPR007273 GO:0015031|GO:0016021
Lja2g0776 268 PANTHER SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN 4 1 268 - -
Lja2g0776 268 MobiDBLite consensus disorder prediction 1 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0776 Lja-Chr2 7060672 7065944 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g0776 1 268 Miscellaneous Gene Families AT1G32050 74.444 6.53e-152 422
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0776 K19995 - gmx:100806586 499.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0776 2 7060672 7065944 Lja2g0776 2 7060672 7065944 ECH