Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0760 ATGTCTCATGAAATTTGCCTAGTACCATTTTTCGGACAAGGTCATCTCTTCCCCTGCATCGAGCTATGCAAACACTTGGCTTCTAGAAACTTCACCGTCACCCTCTTCATCTCCTCCACCCTCTCCACCTCTATCCCTTCTTCCCTCCGCCAACACCCTCTCATTCAAATCACTGAAATCTCATCACCGCCTTCGCCGGAGCAACCACCTCACCCACACCACGGCCACGACGACCTGGCCCGAGGGCTGGATGACATCCTCTCCGACAAAACCCAGCGTCTGGCTCGACCCGTTTGTGCAATCTTCGACGTCATGATGAGCTGGTCCACCGATATTTTCAAAAAATTTGATATTCCCACGGTGGCGTTCTTCACCTCCGGCGCTTGCACATCCGCCGTGGAGCTCGCCACATGGAAAGACCACACGTTAGACTTAAAACCGGGCGAGACCCGTTTTCTTCCCGGGTTACCCGAAGACATGGCGCTCACGTCTTCTGACCTTAAACGACGACGTCATGATCCCCCACCTCCGCCACCGCCACATCATGGCTTTCCTCTACCGCATGGTGGTCCGGGCCCCGGGAAGATGGGTCCACCTAAACTAGGGGAACAACCTCCATGGGTGGAGGATATCCGAGAAACAATGGCGTTGATGATCAACACGTGTGATGAATTGGAACGTCCATTTATCGACTACATTGCAAACCATGTCGGAAAACCGGTTTGGGGTGTTGGACCGCTTTTACCCGAGAAGTATTGGAACTCAGCCGGTTCAGTTATCCACGATCGGGATATCCGGTCGAACCGACAATCCAGCGTCACTGAGGAAGAAGTCACCCAATGGTTAGATTCAAAGTCACATGGATCCGTGTTGTACGTGTCATTTGGTAGTGAAGTAGGCCCTACGGTGGAGGAGTATCAGAATCTAGCTCAAGCACTCGAGACATCTAAACAACCTTTTATATGGGTGCTCCAACCCGGTTCAGGTAGACCGGGTCCTCCGCCGATTTTTGCTGCCGGTTCAGGAGGTCCAGAAGCAGAAAAAGATGGATATTTTCCTCATGGGTTGGATAGTAGAGTTGGGAATAGAGGTTTGATTATACATGGATGGGCACCACAATTGTTGATACTGAGTCACCCATCAACGGGTGGATTCTTATCCCATTGTGGATGGAATTCAACGGTGGAGGGTATTGGACGTGGAGTCCCAATCTTGGCTTGGCCAATAAGGGGTGATCAATACCATGATGCTAAGTTGGTGGTGAGTCATCTTAAGGTGGGTTACATGGTCACTGATGATCTATCAGAAAAGGTGACCAAGGATGATGTTGTTAAGGGAATAGAGAGGTTGATGGGTGATAAAGAGATGAAGGAAACAGCTGAGATTCTTAGTGCCAAGTTTCAGAATGGGTTTCCAAGAAGTTCTGTGGCAGCTTTAGATGCATTTAAGGATTATGTCCATAAGAAATTATTAGTCTAG 1479 0.4956 MSHEICLVPFFGQGHLFPCIELCKHLASRNFTVTLFISSTLSTSIPSSLRQHPLIQITEISSPPSPEQPPHPHHGHDDLARGLDDILSDKTQRLARPVCAIFDVMMSWSTDIFKKFDIPTVAFFTSGACTSAVELATWKDHTLDLKPGETRFLPGLPEDMALTSSDLKRRRHDPPPPPPPHHGFPLPHGGPGPGKMGPPKLGEQPPWVEDIRETMALMINTCDELERPFIDYIANHVGKPVWGVGPLLPEKYWNSAGSVIHDRDIRSNRQSSVTEEEVTQWLDSKSHGSVLYVSFGSEVGPTVEEYQNLAQALETSKQPFIWVLQPGSGRPGPPPIFAAGSGGPEAEKDGYFPHGLDSRVGNRGLIIHGWAPQLLILSHPSTGGFLSHCGWNSTVEGIGRGVPILAWPIRGDQYHDAKLVVSHLKVGYMVTDDLSEKVTKDDVVKGIERLMGDKEMKETAEILSAKFQNGFPRSSVAALDAFKDYVHKKLLV* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0760 492 MobiDBLite consensus disorder prediction 178 200 - -
Lja2g0760 492 Gene3D Glycogen Phosphorylase B; 261 468 - -
Lja2g0760 492 Gene3D Glycogen Phosphorylase B; 1 259 - -
Lja2g0760 492 CDD GT1_Gtf-like 5 482 IPR002213 GO:0008194
Lja2g0760 492 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 4 487 - -
Lja2g0760 492 MobiDBLite consensus disorder prediction 167 205 - -
Lja2g0760 492 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 276 465 IPR002213 GO:0008194
Lja2g0760 492 ProSitePatterns UDP-glycosyltransferases signature. 370 413 IPR035595 -
Lja2g0760 492 PANTHER GLYCOSYLTRANSFERASE 4 489 - -
Lja2g0760 492 PANTHER EG:EG0003.4 PROTEIN-RELATED 4 489 - -
Lja2g0760 492 MobiDBLite consensus disorder prediction 59 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0760 Lja-Chr2 6947651 6949247 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g0760 2 470 Glycosyltransferase AT2G36780 29.709 9.94e-60 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0760 - - pvy:116122447 634.409
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0760 2 6947651 6949247 Lja2g0760 2 6947651 6949247 ECH