Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0759 ATGGCGACGAAGGTGGTTTACGAAGGGTGGATGGTGCGGTATGGCCGCCGTAAGATCGGGCGATCGTTCATCCACATGAGGTACTTCGTGCTGGAGTCGCGGCTGCTTGCATATTACAAGAGGAAACCGCAGGATAATCAGGTTCCCATTAAAACACTGCTAATTGATGGCAACTGTAGAGTAGAGGATAGAGGCTTGAAGACCCATCATGGACATATGGTTTATGTTTTGTGTGTTTACAACAAGAAAGAAAAGAACCATCGAATTATGATGGCAGCATTTAATATCCAAGAGGCCCTAATCTGGAAGGAAAAAATTGAGTATGTCATTGATCAGCATCAGGGAGCACAGCCATCAAATGGCAACAAGTATATTTCTTTTGAGTACAAATCTGGAATGGACAATGGGAAGACAGCTTCTTCCTCAGACCGTGAAAGCCAGTTCAGTGCTCAGGAGGATGAAGATGAGTCTCAACCAAATTTGTTAAGGAGGACAACAATTGGAAATGGTCCTCCTGAATCAATTTTTGACTGGACACGAGAAATTGATTCAGATTTGTCAAATCAGAATATCAATAACCAAGCATTTTCAAGAAAGCATTGGCGTCTTTTACAATGCCAAAATGGACTTCGTATTTTTGAAGAACTTCTTGAAGTTGACTACCTTCCAAGGAGCTGTAGTAGAGCTATGAAGGCAGTGGGTGTTGTGGAGGCCAGTTGTGAAGAAATTTTTGAGCTTGTAATGAGCATGGATGGGACACGGTTTGAATGGGATTGCAGTTTCCAACACGGTAGTTTAGTTGAGGAGGTGGATGGGCATACCGCTATTCTCTATCACCGACTTCTGCTGGACTGGTTCCCAATGTTTGTATGGCCTCGTGATCTTTGTTATGTACGTTACTGGCGGCGAAATGATGATGGAAGTTATGTGGTTTTATTTCGCTCTAGGGAACATGAGAATTGCAGTCCACAGCCAGGGTGTGTTCGGGCACATATTGAGAGTGGAGGATATAATATTTCCCCTTTAAAACCTCGAAATGGGAGGCCCAGGACACAAGTCCAGCATCTTATGCAGATTGATTTAAAGGGTTGGGGTGCAGGTTACGTACCATCTTTTCAGCAGCATTGTCTCCGCCAAATGTTAAACAGTGTGGCTGGTTTACGTGAATGGTTTGCCCAAGCGGATGAAAGGAGTGCTCCTCCTCGAATTCCCGTAATGGTTAATATGTCCTCAACAGCTGTCTCTTCAAAGGGTCAGAAGCCAAATGATTTATCTATGCATCCTACTTCCCTCGATCAAATAAATTTTGCAAGTAGAAATTCTGCTTTGATGGATGAATATTCTGATGAAGATGAAGATTTTCAAATAGCAGAACCTGAGCAAGAGGCATTCCAAAGTGATCTTGATAATGATGTGAGAAGAATAGCCTTGGAGGAAGAACCAGCAACTGTGATTGACTTATCTTCCTTCTCGGGTAATTTACGCCGAGATGATCGTGATAATGCTCGGGACTGCTGGAAAATTTCTGATGGAAATAACTTCAGAGTCAGAAGCAAGCATTTTTGCCATGACAAATCAAAGGTTCCTGCGGGCAAGCATTTGCTGGATCTTGTTGCTGTTGATTGGTTTAAGGACTCAAAAAGAATGGACCATGTGGCTAGGCGTAATGGTTGTGCAGCACAAGTTGCATCAGAAAAAGGATTTTTCTCCTTTATCATCAATCTTCAAGTGCCCGGATCAACCCACTACAGTATGGTGTTCTATTTTGTGACAAAGGAGCTAGTTCCTGGATCCCTTTTGCAACGGTTTGTTGATGGTGATGATGAATTCCGAAACAGCAGGTTTAAGCTCATCCCATCAGTTCCAAAGGGCTCATGGATTGTACGCCAAAGTGTTGGGAGTACTCCTTGTTTACTGGGAAAGGCAGTTGATTGCAACTATATTCGCGGTCCCAAGTATTTAGAAATTGATGTAGATATTGGTTCTTCTACGGTTGCTAATGGAGTTTTGGGGCTGGTTGTTGGTGTGATTACAACATTGGTGGTTGATATGGCTTTTCTTGTACAGGCAAATACTCCTGATGAGTTGCCCGAGAGGCTTATTGGAGCTGTTCGTGTTTCTCATTTAGAGCTTAAATCGGCCATAGTCCCGAAACTGGAACCAGATCTATCTTGA 2175 0.4313 MATKVVYEGWMVRYGRRKIGRSFIHMRYFVLESRLLAYYKRKPQDNQVPIKTLLIDGNCRVEDRGLKTHHGHMVYVLCVYNKKEKNHRIMMAAFNIQEALIWKEKIEYVIDQHQGAQPSNGNKYISFEYKSGMDNGKTASSSDRESQFSAQEDEDESQPNLLRRTTIGNGPPESIFDWTREIDSDLSNQNINNQAFSRKHWRLLQCQNGLRIFEELLEVDYLPRSCSRAMKAVGVVEASCEEIFELVMSMDGTRFEWDCSFQHGSLVEEVDGHTAILYHRLLLDWFPMFVWPRDLCYVRYWRRNDDGSYVVLFRSREHENCSPQPGCVRAHIESGGYNISPLKPRNGRPRTQVQHLMQIDLKGWGAGYVPSFQQHCLRQMLNSVAGLREWFAQADERSAPPRIPVMVNMSSTAVSSKGQKPNDLSMHPTSLDQINFASRNSALMDEYSDEDEDFQIAEPEQEAFQSDLDNDVRRIALEEEPATVIDLSSFSGNLRRDDRDNARDCWKISDGNNFRVRSKHFCHDKSKVPAGKHLLDLVAVDWFKDSKRMDHVARRNGCAAQVASEKGFFSFIINLQVPGSTHYSMVFYFVTKELVPGSLLQRFVDGDDEFRNSRFKLIPSVPKGSWIVRQSVGSTPCLLGKAVDCNYIRGPKYLEIDVDIGSSTVANGVLGLVVGVITTLVVDMAFLVQANTPDELPERLIGAVRVSHLELKSAIVPKLEPDLS* 725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0759 724 Gene3D - 1 121 IPR011993 -
Lja2g0759 724 SUPERFAMILY PH domain-like 4 116 - -
Lja2g0759 724 CDD START 193 393 - -
Lja2g0759 724 Gene3D - 201 400 IPR023393 -
Lja2g0759 724 PANTHER ENHANCED DISEASE RESISTANCE-RELATED 4 721 IPR045096 -
Lja2g0759 724 SMART START_1 181 393 IPR002913 GO:0008289
Lja2g0759 724 SMART PH_update 5 113 IPR001849 -
Lja2g0759 724 PANTHER PROTEIN ENHANCED DISEASE RESISTANCE 2-LIKE 4 721 - -
Lja2g0759 724 ProSiteProfiles START domain profile. 201 383 IPR002913 GO:0008289
Lja2g0759 724 SUPERFAMILY Bet v1-like 185 381 - -
Lja2g0759 724 MobiDBLite consensus disorder prediction 135 174 - -
Lja2g0759 724 Pfam START domain 227 366 IPR002913 GO:0008289
Lja2g0759 724 CDD PH 7 106 - -
Lja2g0759 724 Pfam Protein ENHANCED DISEASE RESISTANCE 2, C-terminal 506 709 IPR009769 -
Lja2g0759 724 ProSiteProfiles PH domain profile. 4 111 IPR001849 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0759 Lja-Chr2 6933467 6946157 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0759 - - gmx:100806401 1352.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0759 2 6933467 6946157 Lja2g0759 2 6933467 6946157 ECH