Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0737 ATGGGTAAGGGCAATCCACACAAATCGGGAACCGCCAACGACCTTCATACGGCGGCAAGGTCCGGCGATCTCACCGCCGTTCAGTCAATTTTGATTTCAAATCCTCTCGCCGTTAATTCCAGAGATAAGCATTCCAGAACACCACTGCATTTAGCAGCATTTGCCGGGCATGCGGAGGTTGTAAGTTATCTGTGCCAGAACAAGGCTGCTGTTGGTGCTGCTGCTATGGATGACATGGCTGCGGTACACTTTGCGGCGCAGAAGGGGCACTTGAGAGTTGTTCAGGCTCTAGTTTCGGCTGGGGCCGCTATCAAATCCTTTACTCGCAAAGGAATGAGTCCGTTGCATTATGCTGCTCAAGGTTCTCATTTGGAGCTTGTTAAGTACTTGGCCAAGAAAGGGGTTAGCCTCAGTGCGAAGACAAAGGCGGGGAAGACGCCTTTGGATCTTGCTACTGATGAAGAAGTTCGCTCTTTTCTGGAGGGATATGAAAGATCAGCTAAGAATGGAGAATCAAAAGATAAGGATGTAGGTGGAGAATCTAAAGATAAAGATGGAGCTGGAGAATCTAAAGATAAGGATGAAGCTGGAGAATCTGATACAAAGGCGCTGTCATTGGAATCGGAAGGTAATTTGGGTGCTGATGAACGTCCTGCAGCTGTTGTTGATGAAGAAAAAGGTGAGAGAGAGAAGAGGAAGGGTAATGAAGATGATGAACCAAGAGAAGACTTACCACAACCGAAAAAGGCAAGAGTGAAGCTAAGCCATCTCCAAAGTTCAGATGATGCTGAAGAAGAAGAAAACATGTAG 810 0.4691 MGKGNPHKSGTANDLHTAARSGDLTAVQSILISNPLAVNSRDKHSRTPLHLAAFAGHAEVVSYLCQNKAAVGAAAMDDMAAVHFAAQKGHLRVVQALVSAGAAIKSFTRKGMSPLHYAAQGSHLELVKYLAKKGVSLSAKTKAGKTPLDLATDEEVRSFLEGYERSAKNGESKDKDVGGESKDKDGAGESKDKDEAGESDTKALSLESEGNLGADERPAAVVDEEKGEREKRKGNEDDEPREDLPQPKKARVKLSHLQSSDDAEEEENM* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0737 269 ProSiteProfiles Ankyrin repeat region circular profile. 110 142 - -
Lja2g0737 269 ProSiteProfiles Ankyrin repeat profile. 110 142 IPR002110 GO:0005515
Lja2g0737 269 ProSiteProfiles Ankyrin repeat profile. 44 76 IPR002110 GO:0005515
Lja2g0737 269 PANTHER ANKYRIN REPEAT PROTEIN 4 268 - -
Lja2g0737 269 PANTHER - 4 268 - -
Lja2g0737 269 Gene3D - 9 182 IPR036770 -
Lja2g0737 269 ProSiteProfiles Ankyrin repeat profile. 77 109 IPR002110 GO:0005515
Lja2g0737 269 SMART ANK_2a 44 73 IPR002110 GO:0005515
Lja2g0737 269 SMART ANK_2a 77 106 IPR002110 GO:0005515
Lja2g0737 269 SMART ANK_2a 10 40 IPR002110 GO:0005515
Lja2g0737 269 SMART ANK_2a 110 139 IPR002110 GO:0005515
Lja2g0737 269 MobiDBLite consensus disorder prediction 218 263 - -
Lja2g0737 269 ProSiteProfiles Ankyrin repeat region circular profile. 77 104 - -
Lja2g0737 269 MobiDBLite consensus disorder prediction 163 202 - -
Lja2g0737 269 PRINTS Ankyrin repeat signature 45 60 IPR002110 GO:0005515
Lja2g0737 269 PRINTS Ankyrin repeat signature 126 140 IPR002110 GO:0005515
Lja2g0737 269 ProSiteProfiles Ankyrin repeat region circular profile. 44 71 - -
Lja2g0737 269 Pfam Ankyrin repeats (3 copies) 83 159 IPR002110 GO:0005515
Lja2g0737 269 Pfam Ankyrin repeats (3 copies) 15 70 IPR002110 GO:0005515
Lja2g0737 269 MobiDBLite consensus disorder prediction 163 269 - -
Lja2g0737 269 SUPERFAMILY Ankyrin repeat 13 154 IPR036770 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g0737 15 154 Miscellaneous Gene Families AT2G31820 33.566 3.21e-13 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0737 - - lja:Lj2g3v1549660.1 424.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0737 2 6689649 6691111 Lja2g0737 2 6689649 6691111 ECH