Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0735 ATGAAATTGAGGACTACAGCTAATACTAGACAACAAGCTTGTTTTGCTATGAGGGAGTTCACTAGGGGTGAAGAGTATGTAACCATTGGTGAATTCCCTTCTTCCAAGACTAATCACATGAAGAAAGTTTCAGTTCTTCCTCTTGTGTTCCTCATCTTCTATGAGGTTTCAGGGGGTCCTTTTGGTGTGGAGGATACTGTGCATGCTGCTGGTCCTCTGCTGTCCCTGCTTGGCTTCTTGTTGTTCCCACTCATATGGAGTGTTCCTGAGGCTTTGATTACTGCTGAGATGGGTACCATGTTCCCTGAAAATAGTGGTTATGTGGTTTGGGTTTCATCTGCTTTGGGTCCTTATTGGGGGTTTCAGCAAGGTTGGATGAAATGGCTGAGTGGGGTGATAGACAATGCTTTGTACCCAGTTCTGTTTCTTGATTATCTTAAGTCAGCAGTCCCTGCTGTAGGTGGTGGCTTACCTAGAGTTCTTGCAACCTGGGGTCTTACAATAATTCTTACTTACTTGAACTATAGGGGTTTAATCATTGTGGGATGGGTTGCTGTTGCTTTGGGGATTTTCTCACTCCTTCCTTTTGTGGTTATGGGGTTTATGTCAATTCCAGACATAGAACCTTCAAGATGGTTAGGGGCAAATCTACATGATGTTGACTGGAATTTGTATTTGAATACTCTATTCTGGAATCTTAATTATTGGGACTCCATAAGTACTCTTGTTGGAGAAGTGGAAAATCCTAAGAAAACTCTTCCAAAAGCATTGTTCTATGCTGTGATCCTAGTTGTTCTGGGATACTTCTTCCCGCTTCTAATTGGTACCGGTGCCGTTCCTGTCAAGCGTGAGTTGTGGACTGATGGTTACTTCTCGGAGATTGCTTTGATTATCGGAGGAGTATGGCTGAGATGGTGGCTTCAGGCTGCTGCAGCAATGTCAAACATGGGAATGTTCGTTGCTGAAATGAGCAGCGACTCTTTCCAGCTGCTGGGGATGGCTGAAAGGGGAATGTTGCCTGAGTTCTTCAAGATAAGGTCTCGCCATGGAACCCCTCTTATCGGAATACTTTTCTCGGCCTCCGGTGTTCTCTTACTGTCATGGCTGAGTTTTCAAGAAATTGTGGCTGCAGAAAATTTCTTGTACTGTCTTGGAATGATTCTGGAGTTCAATGCATTCATTTTGTTGAGGATCAGATACCCGAACGCGCCTCGACCTTACAAGATACCAGGAGGGACAGTAGGAGCAGTTCTTATGTGTATCCCTCCTACAATACTGATTGGTGTTGTGCTGTATTTCTCCACCCTCAAAGTGTTGGTTATAAGCCTCATTGCTGTGGCGATTGGCCTTGTGATGCAGCCGTGTCTCAAATATGCGGAGAAAAAGAGATGGATGAAGTTCTCCCAGAATTCTGAGCTCACTGATATAAATGATGAGGGCTCTCAATTGGTGACTTAA 1458 0.4431 MKLRTTANTRQQACFAMREFTRGEEYVTIGEFPSSKTNHMKKVSVLPLVFLIFYEVSGGPFGVEDTVHAAGPLLSLLGFLLFPLIWSVPEALITAEMGTMFPENSGYVVWVSSALGPYWGFQQGWMKWLSGVIDNALYPVLFLDYLKSAVPAVGGGLPRVLATWGLTIILTYLNYRGLIIVGWVAVALGIFSLLPFVVMGFMSIPDIEPSRWLGANLHDVDWNLYLNTLFWNLNYWDSISTLVGEVENPKKTLPKALFYAVILVVLGYFFPLLIGTGAVPVKRELWTDGYFSEIALIIGGVWLRWWLQAAAAMSNMGMFVAEMSSDSFQLLGMAERGMLPEFFKIRSRHGTPLIGILFSASGVLLLSWLSFQEIVAAENFLYCLGMILEFNAFILLRIRYPNAPRPYKIPGGTVGAVLMCIPPTILIGVVLYFSTLKVLVISLIAVAIGLVMQPCLKYAEKKRWMKFSQNSELTDINDEGSQLVT* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0735 485 PIRSF AA_transporter 23 482 - -
Lja2g0735 485 PANTHER POLYAMINE TRANSPORTER PUT1 10 483 IPR044566 GO:0022857
Lja2g0735 485 Pfam Amino acid permease 50 422 IPR002293 GO:0016020|GO:0022857|GO:0055085
Lja2g0735 485 Gene3D Amino acid/polyamine transporter I 39 478 - -
Lja2g0735 485 PANTHER POLYAMINE TRANSPORTER PUT1 10 483 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0735 Lja-Chr2 6677190 6679579 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g0735 17 482 Organic Solute Cotransporters AT1G31830 70.975 0.0 690
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0735 - - gmx:100816567 842.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0735 2 6677190 6679579 Lja2g0735 2 6677190 6679579 ECH