Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0734 ATGGGTTTGCAGGAGGATTTTGATCAGTATGCTGTGAAAGCCAAGACTCTGCCAGACAGTACATCTAATGAAAGCAAACTTATTCTCTATGGATTGTTCAAGCAAGCCACTGTTGGACCTGTCAACACCAGCCGTCCTGGGATGTTCAACCCGAGGGACAGAGCTAAATGGGATGCATGGAAGAATGTTGAAGGGAAATCCAAGGAGGAAGCAATGAACGATTACATCACAAAAGTGAAACAGCTGCTGGAAGAAGCCGGCTTGGCTGCTTGA 273 0.4652 MGLQEDFDQYAVKAKTLPDSTSNESKLILYGLFKQATVGPVNTSRPGMFNPRDRAKWDAWKNVEGKSKEEAMNDYITKVKQLLEEAGLAA* 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0734 90 ProSitePatterns Acyl-CoA-binding (ACB) domain signature. 21 39 IPR022408 -
Lja2g0734 90 SUPERFAMILY Acyl-CoA binding protein 3 85 IPR035984 GO:0000062
Lja2g0734 90 Pfam Acyl CoA binding protein 4 79 IPR000582 GO:0000062
Lja2g0734 90 PANTHER ACYL-COA-BINDING PROTEIN-LIKE 1 86 - -
Lja2g0734 90 PANTHER ACYL-COA-BINDING PROTEIN, ACBP 1 86 - -
Lja2g0734 90 PRINTS Acyl-coA-binding protein signature 65 82 IPR000582 GO:0000062
Lja2g0734 90 PRINTS Acyl-coA-binding protein signature 44 59 IPR000582 GO:0000062
Lja2g0734 90 PRINTS Acyl-coA-binding protein signature 21 39 IPR000582 GO:0000062
Lja2g0734 90 PRINTS Acyl-coA-binding protein signature 4 19 IPR000582 GO:0000062
Lja2g0734 90 ProSiteProfiles Acyl-CoA-binding (ACB) domain profile. 3 88 IPR000582 GO:0000062
Lja2g0734 90 CDD ACBP 3 87 IPR000582 GO:0000062
Lja2g0734 90 Gene3D - 1 89 IPR014352 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g0734 1 87 Acyl Lipid Metabolism Gene Families AT1G31812 70.115 4.52e-41 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0734 K08762 - egr:104444221 160.614
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0734 2 6671360 6673246 Lja2g0734 2 6671360 6673246 ECH