Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0728 ATGATGATGATGAGGCGTGGGGTTGTGAACACTGCGCTGTTGGCGGCGAAGGGTTCTTGGGTTAGAGCACCTGCTTCTGCTTCTTCCATGTATGGTGGTGGTTTGAGGAGTTTCTCCACCGCTATGGCAGAGAAGGAGGTTGAACCTTCTCCTCAGCACAGTGCTGGTGGGAAGAAAGATGAAAAGGGGGTTATGAGTTACTGGGGGATTCAAACTTCTAAGGTTACCAAACAGGATGGTACAGAGTGGAAATGGAATTGCTTCAGGCCATGGGAAACTTACAAAGCAGATGTGTCAATTGATCTGGAAAAGCATCACCCAACAAAGACGTTTATGGACAAGCTGGCCTATTGGACTGTCAAGAGCCTCAGATACCCCACTGATTTGTTTTTCCAGAGAAGGTATGGATGCCGAGCAATGATGCTGGAGACAGTGGCAGCTGTGCCAGGCATGGTAGCAGGCATGCTGCTCCACCTGAAATCGCTGCGGCGATTCGAGCACAGTGGTGGATGGATCAAAGCACTCCTGGAAGAAGCAGAAAATGAGCGTATGCATCTGATGACCTTCATGGAAGTGTCAGATCCCAAGTGGTATGAGCGTGCTCTTGTGATAACTGTCCAAGGAGTTTTCTTCAATGCATACTTCTTTGGCTATTTGGTCTCACCTAAATTTGCGCACCGCGTGGTTGGTTACCTTGAGGAAGAGGCTATCCACTCCTACACTGAGTTCTTGAAGGAGCTAGACAGTGGTAAAATAGAAAATGTTCCAGCTCCAGCCATTGCCATAGACTATTGGCAGCTTCCACAAAACGCAACTTTAAGGGATGTTGTCATGGTTGTGAGAGCTGATGAGGCACATCATCGTGATGTCAACCACTTTGCATCGGACATAATCCTCCAAGGACGAGAGTTGAGAGATGCTCCTGCTCCAATTGGTTATCACTAA 945 0.4804 MMMMRRGVVNTALLAAKGSWVRAPASASSMYGGGLRSFSTAMAEKEVEPSPQHSAGGKKDEKGVMSYWGIQTSKVTKQDGTEWKWNCFRPWETYKADVSIDLEKHHPTKTFMDKLAYWTVKSLRYPTDLFFQRRYGCRAMMLETVAAVPGMVAGMLLHLKSLRRFEHSGGWIKALLEEAENERMHLMTFMEVSDPKWYERALVITVQGVFFNAYFFGYLVSPKFAHRVVGYLEEEAIHSYTEFLKELDSGKIENVPAPAIAIDYWQLPQNATLRDVVMVVRADEAHHRDVNHFASDIILQGRELRDAPAPIGYH* 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0728 314 CDD AOX 131 297 IPR002680 GO:0009916
Lja2g0728 314 PANTHER ALTERNATIVE OXIDASE 34 314 IPR002680 GO:0009916
Lja2g0728 314 Gene3D Alternative oxidase 62 311 IPR038659 -
Lja2g0728 314 PIRSF AO 1 309 IPR002680 GO:0009916
Lja2g0728 314 Pfam Alternative oxidase 104 294 IPR002680 GO:0009916
Lja2g0728 314 PANTHER UBIQUINOL OXIDASE 34 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0728 Lja-Chr2 6617030 6619500 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g0728 20 314 Miscellaneous Gene Families AT3G22370 75.484 1.11e-174 486
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0728 K17893 - gmx:547924 508.834
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0728 2 6617030 6619500 Lja2g0728 2 6617030 6619500 ECH