Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0724 ATGGCCACCACCACCACCACCACCACCGCCGCAAAACGCCATAAACTCCTCCACCACCACCAGGAGGAGGAGGATGAAGAACAACAGCCTCTAATACCTGGCCTCCCAGATCACATAGCTCAAATCTGTCTCTCTTCCATCAACAACCCTTCTCTTCTCTTCAGAGTCTGCCACTCCTGGCGCCACCTCATCTACTCTCCTTCCTTCCCTCCTTTCCTCTCTCTCTACGCCATTCTCAGCTCCCACTCTTCCCATTCCGGCGACGGCGGCGACTCAGTTCAGTTCCACAATTTCGACCCAATCTCACAAACTTGGCAAACACTCCCTCCTCCGCCGTCATACTCGCCGCTCCTCCTCCGCCACCCCTCCTTCCTCTCCCGCAACCTCTCCATCCAATCCATCTCCCTCGCCGGAAGCCTCATCCTCCTCGCCGCCACCACCTACAACCTCTCCCCCGCTCTCTCCCGCCCCTTCATCTTCAACCCCCTCTCCCGTTGTTGGTCCCTCGGCCCCCCTCTCCCCACCCCCCGCCGCTGGTGCGCCCTCGGCTCCTCCCGCGGCGCCGTCTACGTCGCCAGCGGCTTCGGCTCCATCTTCTCCGGCGACGTCGCCAGGTCATTACAGAAATGGGAACTCGCCGCCGCCTCCGGCGGCGACGAGTGGGAGAAGAAGGCTGAGCTGAAGCATGGGAGGTTCAGCAGGGAAGCGATCGACGCGGTGGGGTGGAGGGGGAAGCTCTGCATGGTGAACGTGAAGGGCGACGCGGCGAAGGAAGGGGCGGTGTACGACGTGGAGGAGGACGCGTGGAAGGAGATGCCGGAGGGGATGTTGTCTGGGTGGAGAGGGCCGGTGGCGGCGATGGCGGAGGAGATGTACGTCGTCGATGAGGTGAAGGGTGCGGTGAGAAGGTACTTGCCTGAGGAAGATTCATGGGAAGAGGTTTTCGAGTGTGAGAGGCTGAAAGGAGCTGAACAGCTCGTTGCAGAAAAGGGGAAACTCTGTGTCGTTTCTGCCGCCGGGATCTCCGTGGTGGATATCACGGTGGCGCCGCCGAGGGTCTGGGTGGTGGAGTTGCCGGACGGGTTTGAAGCGGTGGCTGTTCATATCTTGCCAAGGATGCCGGTAACTGATTCCGTCAAAGCTTGA 1146 0.6099 MATTTTTTTAAKRHKLLHHHQEEEDEEQQPLIPGLPDHIAQICLSSINNPSLLFRVCHSWRHLIYSPSFPPFLSLYAILSSHSSHSGDGGDSVQFHNFDPISQTWQTLPPPPSYSPLLLRHPSFLSRNLSIQSISLAGSLILLAATTYNLSPALSRPFIFNPLSRCWSLGPPLPTPRRWCALGSSRGAVYVASGFGSIFSGDVARSLQKWELAAASGGDEWEKKAELKHGRFSREAIDAVGWRGKLCMVNVKGDAAKEGAVYDVEEDAWKEMPEGMLSGWRGPVAAMAEEMYVVDEVKGAVRRYLPEEDSWEEVFECERLKGAEQLVAEKGKLCVVSAAGISVVDITVAPPRVWVVELPDGFEAVAVHILPRMPVTDSVKA* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0724 381 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP25 5 374 - -
Lja2g0724 381 SUPERFAMILY Kelch motif 89 336 IPR015915 GO:0005515
Lja2g0724 381 SUPERFAMILY F-box domain 20 69 IPR036047 GO:0005515
Lja2g0724 381 Pfam Kelch motif 132 177 - -
Lja2g0724 381 Gene3D - 75 333 IPR015915 GO:0005515
Lja2g0724 381 MobiDBLite consensus disorder prediction 1 29 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0724 - - var:108335374 468.774
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0724 2 6581612 6583267 Lja2g0724 2 6581612 6583267 ECH