Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0723 ATGATCGAGGAACAGCCATTTGAATTGCGAAAGAGCCCTTCGCGAAGGCGCTTGTTGAGACCTGCGGTTGGTACCGATGACAGGGGTTGGACCTTGCTTCATGTTGGTTCTCGCAAAGGTGATATCAAACTGGTGAGAAAACTTCTCAAGGAAGGAACAGATGTCAATGTGTCTGCAGGGGGCCCTAAATCAAAAGGGGTGACACCCCTCCACCTCGCTGCTGAAGGTGGTCACCTTGGAGTCATGGATGAACTGCTTGAGCGTGGTGCCAACATTGATGCCAGAACAAAAGGGGCTTGTGGCTGGACTCCACTTCACATTGCAGCCAAAGAGAGGAGGAAGGATGCTGTGAAGTTCTTGATAGAGAATGGAGCTTTCTTGCCACCGGACATCAATGATTGCCGATTTAATCCTCCTCTTCATTACTGCCCAGGACTTGAATGGGCCTATGAAGAGATGAAGCGAATTCGACATGTAGACTCATCTGCTGGGGAGACATCTTGCAGCTCTGAAAGTTAA 519 0.4952 MIEEQPFELRKSPSRRRLLRPAVGTDDRGWTLLHVGSRKGDIKLVRKLLKEGTDVNVSAGGPKSKGVTPLHLAAEGGHLGVMDELLERGANIDARTKGACGWTPLHIAAKERRKDAVKFLIENGAFLPPDINDCRFNPPLHYCPGLEWAYEEMKRIRHVDSSAGETSCSSES* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0723 172 ProSiteProfiles Ankyrin repeat region circular profile. 28 57 - -
Lja2g0723 172 ProSiteProfiles Ankyrin repeat profile. 100 125 IPR002110 GO:0005515
Lja2g0723 172 Pfam Ankyrin repeats (3 copies) 33 125 IPR002110 GO:0005515
Lja2g0723 172 ProSiteProfiles Ankyrin repeat profile. 28 60 IPR002110 GO:0005515
Lja2g0723 172 PANTHER ANKYRIN REPEAT FAMILY PROTEIN 5 171 - -
Lja2g0723 172 PANTHER ANKYRIN REPEAT AND PROTEIN KINASE DOMAIN-CONTAINING PROTEIN 1-LIKE 5 171 - -
Lja2g0723 172 SUPERFAMILY Ankyrin repeat 26 143 IPR036770 -
Lja2g0723 172 ProSiteProfiles Ankyrin repeat profile. 65 97 IPR002110 GO:0005515
Lja2g0723 172 ProSiteProfiles Ankyrin repeat region circular profile. 65 97 - -
Lja2g0723 172 SMART ANK_2a 65 94 IPR002110 GO:0005515
Lja2g0723 172 SMART ANK_2a 100 133 IPR002110 GO:0005515
Lja2g0723 172 SMART ANK_2a 28 57 IPR002110 GO:0005515
Lja2g0723 172 Gene3D - 16 167 IPR036770 -
Lja2g0723 172 PRINTS Ankyrin repeat signature 66 81 IPR002110 GO:0005515
Lja2g0723 172 PRINTS Ankyrin repeat signature 116 130 IPR002110 GO:0005515
Lja2g0723 172 ProSiteProfiles Ankyrin repeat region circular profile. 100 125 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g0723 33 155 Acyl Lipid Metabolism Gene Families AT5G53470 31.707 4.84e-11 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0723 - - aprc:113868977 279.641
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0723 2 6574668 6577705 Lja2g0723 2 6574668 6577705 ECH