Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0714 ATGGCCGCCAACAACAAATTCAAGAAGTCCAATTTGCCTTCTCATTTTAACTTCTGCATCACCCTTTTCTCCCTTCTCCTTTTCACCATCCCAGCTTATTTCCTCATTCAAAACTCCACCACTATCTCCAAATGCACCCCTTTTACCAAGGCCTGGTCTGGTGATCTCCGTTTAGCCGAATTTGCATGGAACCACCTCCAATTTCTTGAACACAATCCTCCCCCCACACCTCTCAAAATTGCTGTCTTCACCAGAAAATGGCCTATTGGAACAACCCCTGGTGGCATGGAACGCCACGCGCACACCCTTCACACTGCATTAGCAAACCGTGGCCATAGAGTTCACATCTTCACTTCTCCCCCACAAGATACAAAAAATCAACAAGCAGGGTCACCATCACCAACTTCACCTCACATCCATTTCCATGAAGGGGAGCCAGGTAAGTGGCGCTACAACAAAGCATGGGAACAATTTCTGGTTGAAAACCAGCTAGAACCTTTCGATGTTGTTCACTCAGAAAGTGTGGCACTTCCTCACTGGCTCGCGCGTGATCTCCCGAACCTTGCAGTATCTTGGCATGGCATAGCACTGGAGAGCTTGCAATCAAGCATTTTCCAGGACTTGGCTCTTGGTTCTGATGAGACAAGATCCCCTGATTTTGACAAAGGCTTACAAGGGGTTGTCCCTAAGATTCTGAATGAGATACGGTTCTTCAGGAAATACAGTCATCATGTTGCTATCAGTGATAGTGTTGGTGAGATGCTAAGGGATGTGTACCAAATTCCAAGCAGAAGGGTCCATGTGATTCTCAATGGTGTTGATGGGGAAGATTTCAAACAAGATGTTGAGTTGGGAAAAGAGTTCAGAACCAAAATTGGGATCCCAAGCAATGCTAGTTTAGTACTTGGTGTGGCTGGAAGATTAGTGAGGGACAAAGGTCATCCTCTGCTTTATGAAGCATACTCCAGGCTAATAACAAAGCATCCCAATGTGTACTTGATTGTAGCTGGCTCTGGACCATGGGAGAATCGGTACAAGGATTTAGGGAACCAAGTTCTTGTTCTTGGATCAATGAATCCTTCCATGCTAAGAGGATTCTATAACGCGATTGACATTTTTGTGAATCCTACACTTAGACCACAGGGGCTTGATCTTACTCTGATGGAGGCCATGATGAGTGGGAAGCCTCTTTTGGCATCAAGGTTTCCAAGCATTAAAGGTAGTATTGTGGTTGATGATGAATTTGGTTTCATGTTCTCTCCCAATGTGGAGTCCCTATTGGAGGGACTGGAAGCAGTGGTTAAGGAAGGGCAAGAGAGGCTAGGAAGGAGAGGGAAGGCATGCCGTGAATATGCAACTTCGATGTTTACAGCAACAAAGATGGCATTAGCATATGAGAGGCTATTCCTCTGCATAAAACATGATGCATTTTGTACCTATCCTTGA 1446 0.4537 MAANNKFKKSNLPSHFNFCITLFSLLLFTIPAYFLIQNSTTISKCTPFTKAWSGDLRLAEFAWNHLQFLEHNPPPTPLKIAVFTRKWPIGTTPGGMERHAHTLHTALANRGHRVHIFTSPPQDTKNQQAGSPSPTSPHIHFHEGEPGKWRYNKAWEQFLVENQLEPFDVVHSESVALPHWLARDLPNLAVSWHGIALESLQSSIFQDLALGSDETRSPDFDKGLQGVVPKILNEIRFFRKYSHHVAISDSVGEMLRDVYQIPSRRVHVILNGVDGEDFKQDVELGKEFRTKIGIPSNASLVLGVAGRLVRDKGHPLLYEAYSRLITKHPNVYLIVAGSGPWENRYKDLGNQVLVLGSMNPSMLRGFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPLLASRFPSIKGSIVVDDEFGFMFSPNVESLLEGLEAVVKEGQERLGRRGKACREYATSMFTATKMALAYERLFLCIKHDAFCTYP* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0714 481 Gene3D Glycogen Phosphorylase B; 78 281 - -
Lja2g0714 481 PANTHER GLYCOSYLTRANSFERASE 1 481 - -
Lja2g0714 481 Gene3D Glycogen Phosphorylase B; 282 452 - -
Lja2g0714 481 MobiDBLite consensus disorder prediction 120 135 - -
Lja2g0714 481 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 79 469 - -
Lja2g0714 481 CDD GT4_PimA-like 79 469 - -
Lja2g0714 481 Pfam Glycosyltransferase Family 4 94 274 IPR028098 -
Lja2g0714 481 PANTHER GLYCOSYLTRANSFERASE 1 481 - -
Lja2g0714 481 MobiDBLite consensus disorder prediction 120 143 - -
Lja2g0714 481 Pfam Glycosyl transferases group 1 300 446 IPR001296 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0714 Lja-Chr2 6519055 6520569 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g0714 1 481 Glycosyltransferase AT4G19460 63.232 0.0 636
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0714 - - gmx:100817087 806.594
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0714 2 6519055 6520569 Lja2g0714 2 6519055 6520569 ECH