Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0691 ATGGCGAGTGAATCTGGAACGAGAGATCCTTCAACTCCGATGTCGTCGAATTCCATTGAATCCTCCTACATTGGTTCCTTCATTAGCTTGATTTCCAAGTGCGATGTTCGCTACGAGGGCGTTCTCTCTTCTCTCAACATTCACAATTCCACCATCGCCTTGAACAACGTTAGATCCTATGGAACTGAGGGGAGAAGAAAAGATGGTCCACAAGTTCCTCCAAGTGATAAAGTTTATGAATACATTCTTTTCAGAGGAAATGATATTAAGAATTTGAACCGTAATCGGAATGATATGGGTTCCCTGACTCTAGCATCCTCTGTACCGATACCTTCTCCGGCATCCTCTGGTTCCTCTGTACTGATTCCTTCTCCAGCATCTCAAGCACCATTACTTTCGCTACCAACTTCAGTTCATAAGTACTCAGCTCCACAGTTCACTGAAGAGTTCGATTTTGAGGCCATGAATGAAAAGTTCAAAAAGGATGAAGTATGGGGTTCTCTAGGAAAGGCAGCCACAAAAATAGAGGGAGTGGAGGGTAATGAACCTCCTCTCAACGTCTGTAATAGAGAATGTGATCATGGGATGATACCAAACCCCAAGTCTGCATACAAGAAAGATGACTTTTTTGATACAATTTCTTGTAACTCTATGACTCGGGGATCTAGGAATGGGCAACATCGTTTATCCGAGAGAATGAAATTGGATACTGAGACTTTTGGCAATTTTCAACAGAGGCCTATTGCTTATGGTGGCTATGGTGCTGGTAGGGGTGAGAATTTCCGTGGCTCATATAATTGGGGAAGGGGTCATGGCTATGCTGGGAGAGGGCGTGGTCCGAATTTTCCTTTCTAA 855 0.4374 MASESGTRDPSTPMSSNSIESSYIGSFISLISKCDVRYEGVLSSLNIHNSTIALNNVRSYGTEGRRKDGPQVPPSDKVYEYILFRGNDIKNLNRNRNDMGSLTLASSVPIPSPASSGSSVLIPSPASQAPLLSLPTSVHKYSAPQFTEEFDFEAMNEKFKKDEVWGSLGKAATKIEGVEGNEPPLNVCNRECDHGMIPNPKSAYKKDDFFDTISCNSMTRGSRNGQHRLSERMKLDTETFGNFQQRPIAYGGYGAGRGENFRGSYNWGRGHGYAGRGRGPNFPF* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0691 284 PANTHER DECAPPING 5-LIKE PROTEIN-RELATED 16 93 - -
Lja2g0691 284 ProSiteProfiles DFDF domain profile. 138 174 IPR025762 -
Lja2g0691 284 Pfam FDF domain 145 242 IPR019050 -
Lja2g0691 284 PANTHER SCD6 PROTEIN-RELATED 16 93 - -
Lja2g0691 284 PANTHER SCD6 PROTEIN-RELATED 92 275 - -
Lja2g0691 284 PANTHER DECAPPING 5-LIKE PROTEIN-RELATED 92 275 - -
Lja2g0691 284 Gene3D - 14 98 - -
Lja2g0691 284 SUPERFAMILY Sm-like ribonucleoproteins 22 97 IPR010920 -
Lja2g0691 284 Pfam Scd6-like Sm domain 23 93 IPR025609 -
Lja2g0691 284 SMART FDF_2 144 244 IPR019050 -
Lja2g0691 284 SMART LSM14_2 20 120 IPR025609 -
Lja2g0691 284 CDD LSm14_N 21 93 IPR025609 -
Lja2g0691 284 ProSiteProfiles FFD box profile. 202 217 IPR025761 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0691 Lja-Chr2 6294548 6297932 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0691 K18749 - gmx:102669894 276.944
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0691 2 6294548 6297932 Lja2g0691 2 6294548 6297932 ECH