Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0683 ATGACTTTATCAGACGACGAGGACGAAAATCTAGCTCAATTTCTCGAATCAGAAGTCCTCTCCGAAGTCTCTGATAAGGAAGAGGAAAACTTGGAGGAACCAAAAGCAAAGAGAAAGCGTATTGAAGAAGCTGAGAGTACTAAGCAGGGGCAGGGTACTAAACAAATTTCTGCTCCATTATCTGAGCCTGAGAATTATGGTGTCAACAATGGCGTCGTGCCGAAACGGATTGAGACTGGTTTTTTCAGCAAAATCCCACCTGAGCTTTTCCATCATATCCTTAAATTCCTGTCTTCCGAGGATCTTATTTCATGTTCCGCAGTCTGTACATTTCTAAATTATGCGGCATCTGATGAAGCGTTGTGGCGTCGCTTGTACTGTATGCGATGGGGTCTTCTTCCCCCCACGAGGAAGTTAAGGGAATGCCCATGGAAAAACTTATACATTCAGCGCGATGGAGACGACATGGTTGAACTTGTCAGAAACTGCCAGAATGAGTTTAAGGAGTATTACATTCAAATGCAAGCAGCTAAAAGAAGTCAAGCCCCTAATCCGTCACAGTTGAATGATGATAGGATAATTCTAGACAAAACATTAGCCGATCAAGTGTCATCATGGAAAAGCAGCAGGGGCCTTAGTGATACAGTGGTGACTGATCATGCTTGTTCTGGGGAAACATGCTCGTACTACGCAATTGGAGATGTATTTATTTGTGAAAAGACTGGACAAGTTCATGTTTGTGACGAAACATGTAGGGAAGTAGTAATGGATCCCACCAACGAGCTTTTGGTCTGTACAATATCTGGCCACTGTTTTGACAGATTGCTATCACCTGCTGAAATGGAGCCTGATGCTGAGCAGCAGCAAGGTGGTGCGGCAGATGAGGCAGAACCGTTTATGGGATCTGGCCGTTTTGCACGGGCTTATTTGCTGGGATACAATTGTGCTGATGAAAAGGAGCTTGAAGCTACTTTGAGGTTTTGCTGA 987 0.4428 MTLSDDEDENLAQFLESEVLSEVSDKEEENLEEPKAKRKRIEEAESTKQGQGTKQISAPLSEPENYGVNNGVVPKRIETGFFSKIPPELFHHILKFLSSEDLISCSAVCTFLNYAASDEALWRRLYCMRWGLLPPTRKLRECPWKNLYIQRDGDDMVELVRNCQNEFKEYYIQMQAAKRSQAPNPSQLNDDRIILDKTLADQVSSWKSSRGLSDTVVTDHACSGETCSYYAIGDVFICEKTGQVHVCDETCREVVMDPTNELLVCTISGHCFDRLLSPAEMEPDAEQQQGGAADEAEPFMGSGRFARAYLLGYNCADEKELEATLRFC* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0683 328 MobiDBLite consensus disorder prediction 48 63 - -
Lja2g0683 328 PANTHER F-BOX ONLY PROTEIN 3 272 328 - -
Lja2g0683 328 PANTHER F-BOX ONLY PROTEIN 3 72 271 - -
Lja2g0683 328 SMART fbox_2 85 125 IPR001810 GO:0005515
Lja2g0683 328 MobiDBLite consensus disorder prediction 1 63 - -
Lja2g0683 328 Gene3D - 68 156 - -
Lja2g0683 328 ProSiteProfiles F-box domain profile. 79 125 IPR001810 GO:0005515
Lja2g0683 328 Pfam F-box-like 83 127 IPR001810 GO:0005515
Lja2g0683 328 SUPERFAMILY F-box domain 71 151 IPR036047 GO:0005515
Lja2g0683 328 MobiDBLite consensus disorder prediction 28 47 - -
Lja2g0683 328 Pfam UL92 family 226 289 IPR004289 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0683 - - gmx:100778591 591.652
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0683 2 6182374 6185706 Lja2g0683 2 6182374 6185706 ECH