Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0680 ATGGAGGGCGAGGAAGGCGGTGGCATCAGGCTGAGCAAGAGATTCTCCGACGACAACAAAGGCGGAGCAGGATCAGAGGTTGACTACAAGACCAAATCAGGCACCGCATGGAGCCACTCTTACCTCAACCAGAAACCATGGCACCCTCTCTCTTACCCTAACCAACGCCGCAAATGGATCGCCGAACAAACCCACGCCAACCGTGAACGCCGCACCGAAGAGGTCGCTCGTGAGTATGCTCAGGAGCAAGAGTTTTATCGCCAAACCAATCTCATATCCAAGAAGGACAAGGAGAAGGTGGAGCTCATGCAAGCTGTTAGCTTCATGTATGTTCGTCCTCCTGGTTACAACGCCGAAAGCGCTAAGGCTGCGGAGATGAATGATCAGACTAAAAGAGAGGAGATGACCAGTGAGACCAATGCTGATGCACCACCCTCCTCTTCATTGCCTCCCTCGCGAGTGAATGACGAGAAGAAAAAACGGAGGCCAAAAGATGTTTTCGGGCGTACTCTACCAACTGAAGAAGAATTCAAAGTTCTTAAAAACGCGCCGAAGCTGGAAACAGGAGTTGCTGGCCGGGCAAAACCTTTTGGAGTTGAGGTCCGCAATGTAAAATGTTTAAGGTGTGGGAGCTATGGTCATCAAAGTGGTGATCGTGAATGTCCCTTGAAGGATTCTATAATGCCTAATGAGGAGAGCAGATTGAAAAGAGATGACCCCTTGAATGCAATCATAGCCCACACAGATCCTACTGAGCCTCTAAAATGGGAGCTCAAGCAGAAGCCTGGAATCAGTCCTCCTCGTGGAGGGTTCAAACCAGATGACCCCAACCAGCAGATAGTTGCTGCTGATGACATATTTGATGAGTATGGAGGTTTTCTCAATATGGATAGTATCCCTGATTTGTTGACCAACTTTTCTAAGAAACCAAAGAAGTCCAAAAAGAGCAAGCACAAAAAGCAGCAACTGGTACATTCAGAAACCGAAGCATCTTCTGATGATGGAGAGAAAAGGTCTAAGAAAAAAAAGGTTAAGGTAAACAAGAAGAAGCGAAGTCATGCAGAGTCAAGTTCATCAGACACCTCAGTCTCTGAAAAAGATCATGGAAAAAGCAGACACAAAAGTTCGTATTCATCTGAAGATTCTGACAGTAACGTGAAAGATCGAAGTAAAAGGACTAAACACAAGCATTCTTTTTCACCCAAAGGTTCTGATCAACCTAGGCACACTAGGAGTAAACATCGCAGACAAAGGCATTCCTCTTCATCTGAGGGTTCTGGTTCTGATGGTTACCATGAAAGTTACAAGAACAGTGATAAACATTCTTTTTCGCCTGAAGATTCTGACAATGACAAGGATGACCGGAGTAGAAAGGATATACAAAAGCACAAGAGGAAACAACGAAAAAGACATTCTTATTCCGACGATGATTCTGGTGCTGCTGGTTATCATGTATATCACAAGAGCAGAGATGAGCAGTCTTCTTCATCGGATGATAAATCTAATCATAAAAAAACTAATGTTAAAAGGAGCAGCCATAAGCACTCATCAAAAGCCCATTGCGATTCTCAAGAGTACAGCAGAAAGTTTAGTTTTGATCGCTGGCATGGAGATCAAAAGAGCAGAGGTGGGCATTCTTATTCATCTGAAAATTCAGATATTGACAAGGATGATCAAAGTAGAAGGATCAAACAAAAGCATTCTACTACATCGAAGGGTTCTGAACATACGAGTAAACAGAGCAGGAAAAAGCATTCTTATTCATCTAAGGATTCTGGTGCTGATAGATATCACACAAGTGAAAAGGGCAGATGTGATGATGGGGAAAAGGAAAACCATCATAAGCTGAGAAGGAGCAGACACAAGCATTGA 1872 0.4407 MEGEEGGGIRLSKRFSDDNKGGAGSEVDYKTKSGTAWSHSYLNQKPWHPLSYPNQRRKWIAEQTHANRERRTEEVAREYAQEQEFYRQTNLISKKDKEKVELMQAVSFMYVRPPGYNAESAKAAEMNDQTKREEMTSETNADAPPSSSLPPSRVNDEKKKRRPKDVFGRTLPTEEEFKVLKNAPKLETGVAGRAKPFGVEVRNVKCLRCGSYGHQSGDRECPLKDSIMPNEESRLKRDDPLNAIIAHTDPTEPLKWELKQKPGISPPRGGFKPDDPNQQIVAADDIFDEYGGFLNMDSIPDLLTNFSKKPKKSKKSKHKKQQLVHSETEASSDDGEKRSKKKKVKVNKKKRSHAESSSSDTSVSEKDHGKSRHKSSYSSEDSDSNVKDRSKRTKHKHSFSPKGSDQPRHTRSKHRRQRHSSSSEGSGSDGYHESYKNSDKHSFSPEDSDNDKDDRSRKDIQKHKRKQRKRHSYSDDDSGAAGYHVYHKSRDEQSSSSDDKSNHKKTNVKRSSHKHSSKAHCDSQEYSRKFSFDRWHGDQKSRGGHSYSSENSDIDKDDQSRRIKQKHSTTSKGSEHTSKQSRKKHSYSSKDSGADRYHTSEKGRCDDGEKENHHKLRRSRHKH* 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0680 623 MobiDBLite consensus disorder prediction 257 278 - -
Lja2g0680 623 MobiDBLite consensus disorder prediction 1 30 - -
Lja2g0680 623 MobiDBLite consensus disorder prediction 1 25 - -
Lja2g0680 623 MobiDBLite consensus disorder prediction 517 614 - -
Lja2g0680 623 Pfam N-terminal domain of CBF1 interacting co-repressor CIR 47 82 IPR019339 -
Lja2g0680 623 MobiDBLite consensus disorder prediction 299 623 - -
Lja2g0680 623 PANTHER CBF1 INTERACTING COREPRESSOR CIR 10 492 IPR040014 GO:0003714
Lja2g0680 623 MobiDBLite consensus disorder prediction 351 389 - -
Lja2g0680 623 MobiDBLite consensus disorder prediction 120 169 - -
Lja2g0680 623 MobiDBLite consensus disorder prediction 322 340 - -
Lja2g0680 623 MobiDBLite consensus disorder prediction 470 505 - -
Lja2g0680 623 MobiDBLite consensus disorder prediction 153 169 - -
Lja2g0680 623 SMART Cir_N_3 46 82 IPR019339 -
Lja2g0680 623 MobiDBLite consensus disorder prediction 433 460 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0680 - K06066 gmx:100788280 771.541
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0680 2 6170871 6175322 Lja2g0680 2 6170871 6175322 ECH