Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0671 ATGAAGGAGGAGATAGAGGAACTATGGAGTGAAGTGAGGGAACTGAGCTTGGGAAACAGTGGTAGAGTAGAAAGACTAGAATCCCCACCAACCTCACTCCAATTCCTCAGAAACTTCATCAACCCAAACAAACCCTGCATCATCTCCAACGCCATCACCCACTGGCCAGCACTCTCTTCCTGGACCCACCCCTCCTACCTCTCCCAAACCCTCTCCTCCTCCACCGTCTCCCTCCACCTCACCCCCACCGGCGCCGCCGACGCCCTCGCTCCCCACCCCTCCACCTCCCTCTGCTTCGCCTCTGCTCACGTGCAGCACGTGCCCTTCACCGACGCCCTCAACCTCATCTCCTCCTCCCACCCCTCCAAGTTTGTGGCCTACGCCCAGCAGCAGAACGATTGCTTTCGCTCTGAATACTCTTCCCTCGCCGGTGACTGTGACCCCCATATCGGTTGGGCCACCGAAGCTTTCGGCGCCCAGCCGGAAGCTGTTAACCTCTGGATTGGTACACAACAGTCTCAAACCTCCTTCCACAAGGATCACTATGAGAATCTCTACGCTGTTGTCACTGGAGAGAAGCACTTCCTGCTGTTGCCACCCACTGATGTTCATCGATTGTACATTCGTGATTACCCTGCTGCAACCTACAAATATTCTTGGGATACTGGAGAGTTTGATTTGGAGCTTGAGAAGCCAACTAGATATGTGCCTTGGTGCAGTGTGGATCCTTACCCTTCTCGAGAGACCTTGGATGATGAGATTTCCAAGTTTCCCTTGTACTTCAATGGCCCTCGGCCGTTTGAGTGCACTGTGAAGGCCGGCGAAGTTCTCTACTTGCCAAGTATGTGGTTCCATCATGTTAGACAAGGTTCAGATGATGGAGGATTGACAATTGCAGTAAATTATTGGTATGATATGCAGTTTGACATAAAGTATGCTTATTTCAACTTCTTACAATCTATTCATTACCGTTCTCCTCCAAGTCCATTGATGCATGAGAAATTGTCTGAGGAGATAGATACAGGTGCAGAAGATGATTATGACACTAGATGA 1053 0.5071 MKEEIEELWSEVRELSLGNSGRVERLESPPTSLQFLRNFINPNKPCIISNAITHWPALSSWTHPSYLSQTLSSSTVSLHLTPTGAADALAPHPSTSLCFASAHVQHVPFTDALNLISSSHPSKFVAYAQQQNDCFRSEYSSLAGDCDPHIGWATEAFGAQPEAVNLWIGTQQSQTSFHKDHYENLYAVVTGEKHFLLLPPTDVHRLYIRDYPAATYKYSWDTGEFDLELEKPTRYVPWCSVDPYPSRETLDDEISKFPLYFNGPRPFECTVKAGEVLYLPSMWFHHVRQGSDDGGLTIAVNYWYDMQFDIKYAYFNFLQSIHYRSPPSPLMHEKLSEEIDTGAEDDYDTR* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0671 350 PANTHER HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATED 3 334 - -
Lja2g0671 350 PANTHER BIFUNCTIONAL PEPTIDASE AND (3S)-LYSYL HYDROXYLASE JMJD7 3 334 - -
Lja2g0671 350 Pfam Cupin-like domain 34 309 IPR041667 -
Lja2g0671 350 SMART cupin_9 126 319 IPR003347 -
Lja2g0671 350 Gene3D Jelly Rolls 1 326 IPR014710 -
Lja2g0671 350 ProSiteProfiles JmjC domain profile. 126 319 IPR003347 -
Lja2g0671 350 SUPERFAMILY Clavaminate synthase-like 20 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0671 Lja-Chr2 6076031 6078340 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g0671 1 325 Acyl Lipid Metabolism Gene Families AT3G45880 67.077 2.70e-161 453
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0671 K19219 - gmx:100786655 604.749
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0671 2 6076031 6078340 Lja2g0671 2 6076031 6078340 ECH