Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0658 ATGGGGTTTCTGGATCTTTTTATGGTTGCCTCTTTCCCAGTGATCAAAATATTGATAATCACTGCAATTGGGTTGTGTCTTGCACTGGATAACATCAATTTACTTGGAAAAGATGCAAGGATACAAGTGAATCATCTTGTACATTATGTGTTTAATCCTGCACTGGTGGGTGGCAATTTGGCTGAAACAATTACTTCTGAGAATGTAGCTGTGTTGTGGTTCATGCCAGTCAATATCCTTGCTACATTTGTGATAGGCTCAGCCTTAGGATGGCTTCTTGTCAAACTCACAAAGCCTCCCAAACACATTGAAGGTCTCATATTGGGTGTCTGTTCTGCAGGAAATTTAGGAAACTTGCCTATAATCATTGTCCCGGCTATATGTAAAGACAAAGGTAGTCCTTTTGGAGACCCTGATGTGTGCTATCAATATGGAATGGCTTATGCTTCACTTTCTATGGCAATTGGAGCTGTTTTTATATGGACTTATGTCTACAACATAATGAGGGTTTCCTCAAGTAAAGTCCACAAAGAAGGTAATGGAAGTAGCGACTCTATCAGATTGATGGCTTCAGGGGATTTAATAGAATCACTTCCAGAGGACTGTTTAGAATCACTAAATTCAGGAAAAGACAATGCTGATGATGCATCATACACCTCGCTTCTTTCTTCAAATGAATCTGAGCAGAAAATGGAGGTACCATTCTTTGATAAGATTAAGCACCAGTTGGGAATGATTTTAGGCAACTCCAATTTCAGAGCCATATTTTCACCAGCAACTATTGGAGCGATTGTTGGGTTTATTATTGGTGTAGTTCCCCAGCTACATAATTTCATGATTGGCTCCAATGCTCCACTTCATGTGCTTGAAGACTCTGCTACCATGCTGGGTGATGCAGCCATCCCAACTATAACCCTTATATTAGGTGCCAACCTCCTAAAAGGCTTGAAGGGAGCAAGTACTCCATTTTGGACAATTATAGGAATTATAGCAATCAGATACATTTTGCTTCCAATTGTTGGTGTTCTAATTGTTAAAGGGGCAACAAGCTTGGGTTTGGTGCAACCAGATCCCTTATACCAGTTTATGCTTCTTCTTCAATATGCACTTCCTCCAGCTATGAATATAGGCACCATAGCCCAGTTGTTTGGAGCTGGTGAAAGTGAATGTTCTATTATCATGCTATGGACATATGCTTTGGCATCAATTGCAGTTACTCTTTGGTCAACTTATTTCATGTGGCTAGTGTCTTAA 1254 0.4003 MGFLDLFMVASFPVIKILIITAIGLCLALDNINLLGKDARIQVNHLVHYVFNPALVGGNLAETITSENVAVLWFMPVNILATFVIGSALGWLLVKLTKPPKHIEGLILGVCSAGNLGNLPIIIVPAICKDKGSPFGDPDVCYQYGMAYASLSMAIGAVFIWTYVYNIMRVSSSKVHKEGNGSSDSIRLMASGDLIESLPEDCLESLNSGKDNADDASYTSLLSSNESEQKMEVPFFDKIKHQLGMILGNSNFRAIFSPATIGAIVGFIIGVVPQLHNFMIGSNAPLHVLEDSATMLGDAAIPTITLILGANLLKGLKGASTPFWTIIGIIAIRYILLPIVGVLIVKGATSLGLVQPDPLYQFMLLLQYALPPAMNIGTIAQLFGAGESECSIIMLWTYALASIAVTLWSTYFMWLVS* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0658 417 PANTHER - 1 417 IPR045033 GO:0080162
Lja2g0658 417 Pfam Membrane transport protein 12 408 IPR004776 GO:0016021|GO:0055085
Lja2g0658 417 PANTHER AUXIN EFFLUX CARRIER FAMILY PROTEIN 1 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0658 Lja-Chr2 5976730 5985701 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0658 K24139 - gmx:100785182 621.698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0658 2 5976730 5985701 Lja2g0658 2 5976730 5985701 ECH