Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0655 ATGAAATTTAGATTTTGCCCCAATCACAACTGGTCCAAACTCTTTACCGCAGCGCGCAACTTCGTCGGTGCTCGTCGCGCTTCCACTTCCTCCGCCTCCGCCGCCATGGCTGACAACCAGATCCTCAAAACCAAGCTCTGCATCATCGGAAGCGGTCCCGCCGCCCACACCGCCGCCGTCTACGCCGCCCGCGCCGAGCTCAAACCAATCCTCTTCGAAGGCTGGATGGCCAACGACATCGCCCCCGGCGGCCAACTCACCACCACCACCGACGTCGAGAATTTCCCCGGCTTCCCTGAAGGCATCATGGGCGGCGAGCTCATGGAGCGTTGCCGTCAGCAGTCTCTCCGCTTCGGCACCGAGATTTTCACCGAGACCGTTTCCAATGTCGATTTCTCCGCACGGCCTTTTAGGGTTTTCGCTGAATCGAAAACCGTCGTGGCTGATTCCATCATCGTCGCCACTGGAGCTGTTGCGAAGAGATTGCCGTTCACAGGCTCCGGTGATGGTCCTGATGGCTACTGGAACCGCGGGATATCGGCTTGCGCTGTGTGTGATGGTGCGGCCCCCATCTTCAGGAACAAGCCGCTGGCGGTGATCGGTGGTGGGGACTCTGCCATGGAGGAAGCGAATTTCCTCACCAAGTATGGTTCTGAGGTGTATATAATCCACCGGAGGGACTCGTTCAGGGCCTCGAAGATTATGCAGAGCAAGGCGTTGAGCAATAGCAAGATCAAGGTGATATGGAACTCGGCTGTGGTCGAGGCGTATGGGGAGGGAGATAGCAAGAGGGTTCTTGGTGGGCTGAAGGTGAAGAATTTGGTGACTGAAGAGGTTTCTGATTTGAAGGTCAATGGTTTATTCTTTGCAATTGGGCACGAGCCTGCCACTAAGTTCTTGGATGGTCAGCTAGAACTGGATTCTGATGGCTACGTTGTGACAAAGCCAGGGACCACAAAGACTAGTGTTGAAGGAGTGTTTGCTGCTGGGGATGTTCAGGACAAGAAATATAGGCAAGCTATTACAGCTGCTGGCACTGGGTGCATGGCAGCTCTGGATGCAGAACATTTCCTGCAAGGGATTGGTTTACAACAGGATAAGAGTGATTGA 1110 0.5477 MKFRFCPNHNWSKLFTAARNFVGARRASTSSASAAMADNQILKTKLCIIGSGPAAHTAAVYAARAELKPILFEGWMANDIAPGGQLTTTTDVENFPGFPEGIMGGELMERCRQQSLRFGTEIFTETVSNVDFSARPFRVFAESKTVVADSIIVATGAVAKRLPFTGSGDGPDGYWNRGISACAVCDGAAPIFRNKPLAVIGGGDSAMEEANFLTKYGSEVYIIHRRDSFRASKIMQSKALSNSKIKVIWNSAVVEAYGEGDSKRVLGGLKVKNLVTEEVSDLKVNGLFFAIGHEPATKFLDGQLELDSDGYVVTKPGTTKTSVEGVFAAGDVQDKKYRQAITAAGTGCMAALDAEHFLQGIGLQQDKSD* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0655 369 Pfam Pyridine nucleotide-disulphide oxidoreductase 45 346 IPR023753 GO:0016491
Lja2g0655 369 PRINTS FAD-dependent pyridine nucleotide reductase signature 148 166 - -
Lja2g0655 369 PRINTS FAD-dependent pyridine nucleotide reductase signature 311 333 - -
Lja2g0655 369 PRINTS FAD-dependent pyridine nucleotide reductase signature 284 300 - -
Lja2g0655 369 PRINTS FAD-dependent pyridine nucleotide reductase signature 46 65 - -
Lja2g0655 369 PRINTS FAD-dependent pyridine nucleotide reductase signature 196 214 - -
Lja2g0655 369 PANTHER THIOREDOXIN REDUCTASE 1-RELATED-RELATED 43 365 - -
Lja2g0655 369 Gene3D - 48 357 IPR036188 -
Lja2g0655 369 PANTHER THIOREDOXIN REDUCTASE 43 365 - -
Lja2g0655 369 PRINTS Pyridine nucleotide disulphide reductase class-II signature 321 339 - -
Lja2g0655 369 PRINTS Pyridine nucleotide disulphide reductase class-II signature 175 187 - -
Lja2g0655 369 PRINTS Pyridine nucleotide disulphide reductase class-II signature 286 307 - -
Lja2g0655 369 PRINTS Pyridine nucleotide disulphide reductase class-II signature 192 216 - -
Lja2g0655 369 PRINTS Pyridine nucleotide disulphide reductase class-II signature 244 260 - -
Lja2g0655 369 PRINTS Pyridine nucleotide disulphide reductase class-II signature 83 98 - -
Lja2g0655 369 PRINTS Pyridine nucleotide disulphide reductase class-II signature 104 114 - -
Lja2g0655 369 PRINTS Pyridine nucleotide disulphide reductase class-II signature 149 157 - -
Lja2g0655 369 PRINTS Pyridine nucleotide disulphide reductase class-II signature 45 67 - -
Lja2g0655 369 ProSitePatterns Pyridine nucleotide-disulphide oxidoreductases class-II active site. 182 204 IPR008255 GO:0016491
Lja2g0655 369 Gene3D - 164 296 IPR036188 -
Lja2g0655 369 SUPERFAMILY FAD/NAD(P)-binding domain 41 358 IPR036188 -
Lja2g0655 369 TIGRFAM TRX_reduct: thioredoxin-disulfide reductase 45 358 IPR005982 GO:0004791|GO:0005737|GO:0019430
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0655 Lja-Chr2 5938778 5944991 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0655 K00384 - gmx:100790557 644.039
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0655 2 5938778 5944991 Lja2g0655 2 5938778 5944991 ECH